KEGG   Spironucleus salmonicida: 94300887
Entry
94300887          CDS       T10465                                 
Symbol
SS50377_26864
Name
(RefSeq) DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
ssao  Spironucleus salmonicida
Pathway
ssao03030  DNA replication
ssao03410  Base excision repair
ssao03420  Nucleotide excision repair
ssao03430  Mismatch repair
Brite
Enzymes [BR:ssao01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     94300887 (SS50377_26864)
    6.5.1.6  DNA ligase (ATP or NAD+)
     94300887 (SS50377_26864)
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     94300887 (SS50377_26864)
DNA replication proteins [BR:ssao03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    94300887 (SS50377_26864)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     94300887 (SS50377_26864)
DNA repair and recombination proteins [BR:ssao03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     94300887 (SS50377_26864)
   NER (nucleotide excision repair)
    Other NER factors
     94300887 (SS50377_26864)
   MMR (mismatch excision repair)
    Other MMR factors
     94300887 (SS50377_26864)
SSDB
Other DBs
NCBI-GeneID: 94300887
NCBI-ProteinID: XP_067761355
LinkDB
Position
7:298511..300634
AA seq 707 aa
MSFLKNPIILKTKKAQEPIQKPLDQPLIQSSNFSIICAFLFQIESTTKRLEKLEIFTKLL
IQLSITAPSDITKLLLLLSNQVREPWADGVSFLSCGEQIVRKAISDVFSVKTDEIKQSLQ
TTGDLAISCEIFKKRQPKQFIQSKKLILDAVFSNFLQIADCAGNNSSYDRQTIIKKLLLA
GSGIENRYIVRFLLGKNRLGLQRKTILFALSDFLCYFKLKFKYIPTENLQKHLDSSWGKI
AENIVTSKIIDDLTREDDDDEDLCDDTSLNQTGSVDEILEKVKQQEHEYSYTNLRQLAYI
EVSKAFAKVPSLTFLAENLTQLNTVKITPFIPILPMLAKPVSSFEEILTSNLNFFCEFKY
DGFRAQIHSKNGKMQIFSRSQENMSERFPDVLISVQNAAKHPDFVIDGEIVPVDENGQIL
PFQFLSRRLKIFDSSQNAAKIVFFAFDLMSLNGVEMLGAPLKTRRFLLENCFNSQNLFQL
SSSTLCSNIKEIQDLLSEAITARTEGLIIKSQASRYAPDRRSRHWTKLKKDYLENVGDSF
DLVPVAGWYGKGKRAGVIGSYLLAARNGDEFQTVTCIGTGMSDDFLQDQSWNRMDSQPNN
VRVSERYQGTQGPDFWINPEESQVWEVKVANLSLSLMHTCYVTNGRGIAARLPRLIRNRD
DKRVSECTTAQFVFDRFNAQPDRGGVDEEDDFVVKDSSESSLDDFEE
NT seq 2124 nt   +upstreamnt  +downstreamnt
atgtcattccttaaaaatcctatcatcttgaaaacaaaaaaggcttaagaacctatttaa
aagccactagactaaccacttatataatcttctaatttcagcatcatctgtgcattccta
ttctaaattgagtccacgacaaaacgcctcgaaaaattagaaatcttcactaagttgcta
atataactttcaattacagcaccatccgatataactaaattattgttgctactgtccaac
taggtccgtgagccttgggctgatggagtttccttcctttcctgcggagagtagatcgtc
agaaaagcaatttctgatgttttttcagttaaaacggacgagataaaacaaagcttataa
accactggtgacctagctatatcttgcgaaatattcaagaaacgacaaccaaaacagttt
attcagtcgaaaaaactaatactggatgcagtgtttagtaacttcctctaaattgctgat
tgtgctggtaataactcatcatatgataggtagacgatcattaaaaagttgctattagct
ggatctggaatcgaaaatcgttatattgtacggtttttactgggaaaaaatcgactaggg
ttatagcgaaagacaattttatttgcactttcagatttcttatgttacttcaagttaaaa
tttaaatatataccgactgaaaatctccagaagcacctggatagttcatgggggaaaata
gcagagaacatcgttacgagtaaaatcatagacgaccttacacgagaagatgacgatgat
gaggatttgtgcgatgataccagtttgaattaaactggttctgtagatgaaattctcgaa
aaagttaaatagcaagagcatgaatattcttacactaatctgcgttaattagcttatatc
gaggtgtcaaaagcctttgccaaagtgccttctttaacatttttagctgaaaatttaaca
cagcttaacactgttaaaatcacaccattcatccccattctcccaatgctagcgaaaccg
gtttcatcttttgaagagattttaacttctaatttaaacttcttctgtgagttcaaatac
gacggattccgagcctaaattcattccaaaaacggtaaaatgcaaattttcagccgctcc
caggagaacatgtcagagcgcttcccagacgtcctgataagcgtctagaacgcagcgaaa
cacccagatttcgtaatcgatggtgagatagttccagtggacgaaaatggataaattctt
cctttccagttcctttctcgccgtcttaaaatcttcgattccagtcaaaatgcggcaaaa
atcgtcttttttgccttcgatttaatgagcttgaatggcgtggaaatgctcggtgcgcca
ctgaaaacgcgcagatttctgctagaaaattgttttaactcctagaatctgttttaactg
tcgagttcgacattatgttcaaatataaaagagatataggaccttttgagtgaagcgata
actgcgcggacggaagggctaataattaagtcataagcgagccgctatgctccagataga
cgaagtaggcactggacaaagcttaaaaaagactatttagagaatgtgggcgattctttc
gatctggtgccggtggctggttggtacggcaaggggaaacgtgccggtgtaattgggagt
tatttgctggccgcgcgtaatggtgatgagttttaaacggttacatgtatcggaactgga
atgtctgacgactttctgcaggattaaagttggaatcggatggatagctagcctaacaat
gttcgtgttagcgagcgctatcagggaacgtaaggacctgatttctggataaatccagaa
gaatcataggtttgggaggtcaaagttgcgaatctatcgctttcattgatgcacacgtgt
tatgtgactaatgggcgtgggattgctgcccggttgccacggctgattagaaatcgagat
gataaacgtgtttctgaatgcacaactgcataatttgtgtttgacagatttaatgcacag
ccagatcgtggcggtgtggacgaggaggatgattttgtcgttaaagatagctccgaaagt
agtttagatgatttcgaggagtga

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