Spironucleus salmonicida: 94301060
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Entry
94301060 CDS
T10465
Symbol
SS50377_27037
Name
(RefSeq) Kinase, CMGC CDK
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
ssao Spironucleus salmonicida
Pathway
ssao03022
Basal transcription factors
ssao03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ssao00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
94301060 (SS50377_27037)
09124 Replication and repair
03420 Nucleotide excision repair
94301060 (SS50377_27037)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ssao01001
]
94301060 (SS50377_27037)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssao03021
]
94301060 (SS50377_27037)
03019 Messenger RNA biogenesis [BR:
ssao03019
]
94301060 (SS50377_27037)
03400 DNA repair and recombination proteins [BR:
ssao03400
]
94301060 (SS50377_27037)
Enzymes [BR:
ssao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
94301060 (SS50377_27037)
2.7.11.23 [RNA-polymerase]-subunit kinase
94301060 (SS50377_27037)
Protein kinases [BR:
ssao01001
]
Serine/threonine kinases: CMGC group
CDK family
94301060 (SS50377_27037)
Transcription machinery [BR:
ssao03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
94301060 (SS50377_27037)
Messenger RNA biogenesis [BR:
ssao03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
94301060 (SS50377_27037)
DNA repair and recombination proteins [BR:
ssao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
94301060 (SS50377_27037)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Haspin_kinase
Kinase-like
Kdo
Motif
Other DBs
NCBI-GeneID:
94301060
NCBI-ProteinID:
XP_067761523
LinkDB
All DBs
Position
7:complement(528920..529930)
Genome browser
AA seq
336 aa
AA seq
DB search
MYNKSFLQRYKKLPISSRSGGQGSVFDAIDLKTDAVVVVKKLHFQNELPQSAVCERHVLS
LCTSPFIVQLIGFYSNQNSILFVLEKCDSDLQNVILSPEMRVTVLYQLTQAILYIHSLQI
AHRDVKPANLLIKDGNLKLCDFGLSGRGIKSGGTRGFVPPETMLGGDISVVGAQDIWAIG
ITAICLLMGVENMFQTLNDKVDITDSIIINTLEQLLGTPPKYIFDEQKVEVYTKKNLSPQ
IQQFLQENSASAQEIEFIKMCLIWNPSERPKAQELYSFFKGIVEVPIVPITKEKNVKDLQ
IVLDQDEAPLAGFVLDDESEALAASALDWSMSDLFE
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgtataataagtcatttttataacgttataaaaaacttcctatctcgtcgagatcaggc
ggctaaggatctgtatttgatgccattgatctaaaaaccgacgcagttgtagttgttaaa
aaattacatttttaaaatgaactacctcaatctgctgtatgcgaaagacatgttctatcg
ttgtgtacctcgccgtttattgtctaattaattggattctattctaaccaaaactctatt
ctttttgtactagaaaaatgtgatagtgatcttcagaatgtcattctttctcctgagatg
cgagtaacagtattatattaattgacataagctatattgtatattcactcgttatagatt
gctcatagagatgttaaaccagcgaatttgctaatcaaagatggcaatcttaaattatgt
gactttggtctttctggtagaggtataaaatctgggggcactaggggatttgtacctcct
gaaactatgcttggtggagatattagtgtagttggagcataggatatttgggctatagga
atcactgctatttgtctattaatgggtgtcgaaaatatgttttaaacattaaatgataaa
gtagacataactgatagcattatcattaacacattggaataattattaggaacaccaccg
aaatatatttttgatgaacagaaagttgaagtttatactaagaaaaacttatctccacaa
atatagtaatttttataggagaatagtgcatcagcttaagaaatagaatttattaaaatg
tgtttaatatggaacccttcagaaaggccaaaagcataggaattatatagtttttttaaa
ggaatagttgaggtacccatagttccaataactaaagaaaagaacgtgaaagatcttcag
atagttctagattaagacgaagcaccattagctgggtttgtattggatgatgaaagcgaa
gccttagcagcaagtgctttagactggagtatgagtgatttatttgagtga
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