Spironucleus salmonicida: 94301864
Help
Entry
94301864 CDS
T10465
Symbol
SS50377_27841
Name
(RefSeq) ATP-dependent RNA helicase
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
ssao Spironucleus salmonicida
Brite
KEGG Orthology (KO) [BR:
ssao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssao03009
]
94301864 (SS50377_27841)
Enzymes [BR:
ssao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
94301864 (SS50377_27841)
Ribosome biogenesis [BR:
ssao03009
]
Eukaryotic type
90S particles
Helicases
94301864 (SS50377_27841)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Flavi_DEAD
UTP25_NTPase-like
Motif
Other DBs
NCBI-GeneID:
94301864
NCBI-ProteinID:
XP_067760642
LinkDB
All DBs
Position
8:complement(<258461..>259834)
Genome browser
AA seq
457 aa
AA seq
DB search
MFNFLTKSARFNKQKLDNTYELIRNKQNKDPSNFVCIQSQQPTAADGAPETDAAYLSQAN
TELENYNYDLFRSFSGLFPALQTALKSQKITVPTLPQSLAFGPISGRQDMLLVAQTGSGK
TLAYLIPLVNSLLNGSEKGMRALILVPTKELALQVHKAALSLTQRIKFPILSSASAPISK
LAIGISTPHAVPLALLSSISYLVLDECDALLQKLNLKKIDNILNIIQQQQNVQISLLSAT
LNSELNLVANSFLANKAQIFLNRQKANKNIFHDFVNCGKSAHKSLVLKQILTENRPPFIV
FCSENSTAKSVFQELNLNSNFPSLLLIGTMNESERKVNYLKFRQQRSLVLVATDVACRGL
DFFGVNCVIQYDLASDIEHYIHRSGRSGRQQKGRSVNLYTLKERERGGVDEIWKACEECE
RKGFQENRKGGANVERKDEMNVELKFKLKEAGKVDEQ
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgttcaattttctcacgaaatccgcccgattcaacaagcagaaactggacaatacctac
gaactgatcagaaacaagcagaacaaggacccctcgaattttgtctgcatccaatcgcag
cagcccacagcggcggacggcgccccagaaactgacgcagcctacctctcccaggccaat
acagagctcgaaaattacaattacgaccttttccgctccttttccggtctttttccggct
ctttaaaccgctctaaaatcacaaaaaattactgtgccgacgctgccgcaaagcctcgct
tttgggccaatttcgggccgccaggacatgcttttagtcgctcagacgggctctggcaag
actctcgcgtacttgatcccactcgtaaattcgctcctaaacggctcagaaaagggcatg
cgagcgctaattctcgtccccacgaaggagctcgccctgcaggtccacaaagcggcttta
tcgcttacgcagcgcatcaaattcccgattttgagctccgcttcagcgccaatttcaaaa
ctcgcaatcggcatctccactccgcacgccgtcccgctggcgctgctttcttcgatatct
tacctggttctcgacgaatgtgacgctttgctgcaaaaactaaacttgaaaaaaattgat
aatatacttaatattatataataataacaaaatgtataaatttcgctcctaagtgcaact
ttgaattctgaattgaatttggttgccaattcctttttggccaataaagcgcaaattttt
ttgaaccggcagaaggcgaataagaacatttttcacgacttcgtgaactgcggaaaatcc
gctcacaaatcgctcgttttgaagcaaattttgaccgaaaatcggcctcctttcatcgtt
ttttgctcagaaaattctacggcaaaatcggtttttcaagaattgaatttgaattcgaat
tttccttccctccttttaattggcacaatgaacgaaagtgagcgaaaagtgaattatttg
aaattcaggcagcagcggagcctcgttttggtggccacggacgtcgcctgccgcggcctc
gacttttttggcgtaaattgcgttatttagtacgatttggcaagtgatatagagcattat
atccataggagtggaaggagtggaaggcagcaaaaaggaaggagtgtgaatttgtatact
ttgaaggagcgggaaagaggtggagtggacgaaatttggaaggcctgcgaggagtgtgaa
aggaaggggttttaggaaaataggaagggaggtgcaaatgtggagcggaaagacgaaatg
aatgtggaattgaaatttaaattgaaagaagcggggaaagtagacgagcagtga
DBGET
integrated database retrieval system
