KEGG   Spironucleus salmonicida: 94302261
Entry
94302261          CDS       T10465                                 
Symbol
SS50377_28238
Name
(RefSeq) RNA polymerase II subunit Rpb5a
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
ssao  Spironucleus salmonicida
Pathway
ssao03020  RNA polymerase
ssao03420  Nucleotide excision repair
Brite
Transcription machinery [BR:ssao03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     94302261 (SS50377_28238)
  RNA polymerase III system
   RNA polymerase III
     94302261 (SS50377_28238)
  RNA polymerase I system
   RNA polymerase I
     94302261 (SS50377_28238)
DNA repair and recombination proteins [BR:ssao03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      94302261 (SS50377_28238)
SSDB
Other DBs
NCBI-GeneID: 94302261
NCBI-ProteinID: XP_067761036
LinkDB
Position
8:860403..861062
AA seq 219 aa
MSELPSSKDCYKIRQTCCEMLADRGYILKNDAFASFQELSVQPFFEFEQKYASQPTNWVL
YGEHLTRVSKNTSDKTPESIYLQCIPDLKSQTLDDVLNQMREKLYDRIIIVSFTGLPKKP
LQEKLDIQSNASKVIAEVFSHDRLIFNITKHFLVPKHTLLTETEKLQILKTYKVSEDQLP
VIEKTDPVARYLGLDQRNVVMITRISENSGKYINFRICK
NT seq 660 nt   +upstreamnt  +downstreamnt
atgtccgaacttccttcgtcaaaagattgttataagattcgtcagacatgttgtgaaatg
ttagcggatcgtggttatattctcaaaaatgatgcatttgcatcattttaggaattatca
gtctaaccattttttgaatttgaataaaaatacgcatcttaaccaactaattgggtttta
tatggagaacatcttactagagttagcaagaatacatcagataaaactcccgagtcaatt
tatttatagtgtataccagatcttaaatcataaactttggatgatgttttgaatcaaatg
cgagaaaagttatatgacagaatcataattgttagttttacaggtttaccaaagaaacct
ttataggaaaaactggacatttagtctaatgctagtaaagttattgctgaagttttctcc
catgataggttgatttttaatattacaaaacactttttggtcccaaagcacactttactt
acagaaacagaaaagctttaaatattaaaaacttataaggtcagtgaagaccagcttcca
gtaatcgagaaaacagatcctgtggctagatacttaggattagaccaaaggaatgttgta
atgatcactagaatcagtgaaaatagcggaaaatatattaatttcagaatctgtaaatga

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