Spironucleus salmonicida: 94302374
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Entry
94302374 CDS
T10465
Symbol
SS50377_28351
Name
(RefSeq) putative splicing factor U2AF
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
ssao Spironucleus salmonicida
Pathway
ssao03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
94302374 (SS50377_28351)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssao03041
]
94302374 (SS50377_28351)
Spliceosome [BR:
ssao03041
]
Complex A
U2 snRNP components
U2 related factors
94302374 (SS50377_28351)
Complex B
94302374 (SS50377_28351)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caud_bapl16_2nd
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
94302374
NCBI-ProteinID:
XP_067761145
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All DBs
Position
8:1044224..1044673
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AA seq
149 aa
AA seq
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MTCEFFATIGCCKYDNACSRHHIAQESSNLVVIPNLCPLTKSIELNEQLLLQSVKEIVRF
ASENSHIVDFTVAVNNNHLYGTVYLLFESIIAANAFVLSLPKAFSGKDIVARFLPHKVLK
PIFCNVRNCDGYFCQKVHEKFFSRKDILD
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
atgacatgtgaattctttgccacaattggttgctgcaaatatgataatgcatgttcacga
catcacatagcataagaatcttcaaatttagtggtgattcctaatttatgcccactgaca
aagagtatagaattgaacgaatagttacttttacagtctgtcaaagagatagtaagattt
gctagtgaaaactcccatattgtagattttactgtcgctgtgaataataaccatttatat
ggtactgtatatttactatttgaatcaattattgcagcaaatgcatttgtacttagtctt
cccaaagcattttcaggaaaagatattgtggctagatttcttccacacaaagtactaaaa
cctatattctgcaatgtaagaaactgtgatggatacttttgtcagaaggtgcatgagaag
ttttttagtcgaaaagatatattggattga
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