Serratia sarumanii: SSARUM_000113
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Entry
SSARUM_000113 CDS
T10280
Symbol
hmsP
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
ssar Serratia sarumanii
Brite
KEGG Orthology (KO) [BR:
ssar00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
SSARUM_000113 (hmsP)
Enzymes [BR:
ssar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
SSARUM_000113 (hmsP)
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Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
Motif
Other DBs
NCBI-ProteinID:
WGZ63078
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All DBs
Position
125214..127220
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AA seq
668 aa
AA seq
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MRVRRSLTIKQMATVSGVALVTICIFIVIQLFHFVQQRRDDYAQQLENIAHSVRQPLAEA
VLRMDVPEAKKVLNTLLPVGILSRADIVLPNEFQALHANFPPERPVPTLIARLFELPIQI
SVPLYSLERVPANQQPLAYLVLQADSFRMYQFIRSILSTMLSTYLLLALILSVAITWCMN
RLMVHPLRAMAKELENISQDEAPYHQLMLPTLHQDDELGLLVRNYNRNQQTLAKAHADMS
RLSTRHPVTELPNPALLNALLEQHIASSLRPERFNLLVIGIETLHEASGVMSPAMREALL
LALAKKLRGCIDENGVLAQLSNTEFAILAKGTERPFHAMQLARRIMAEINAPLTLEGLAL
RPNASIGIAHYLNQGESAEQLLRSATSAMMSAHREGKNQILFFEPSLTERTQKRLTQESE
ILHGIEQRHFTLFLQPQIDMQSNEVIGAEALLRWQQYDGSYTLPADVIPLAEELGVIVPL
GNWVLEESCRILADWQQRGIALPLAVNVSGIQMQHEAFVPHLKNLLAQYRIDPRKLLLEI
TETVRIDDLDRALALLRELHDLGLSIALDDFGMGYSSLEYLNRLKSLPIDLIKIDRSFIQ
GLPADDAMVRIVSAISEVLALPVMAEGVENAEQRDCLLQHGIRSGQGFLFARPLPRAAFE
AEFCRAAP
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
ttgcgggtcaggcgttcgttaacgattaagcagatggcgacggtgtccggcgtggcgctg
gtcacgatctgcatctttatcgtgatccagttattccactttgtgcagcagcgcagggat
gactacgcccagcaactggagaatatcgcgcactccgtgcgccagccgctggcggaagcg
gtgctgcgcatggacgtgccggaagccaaaaaggtgctgaacacgctgttgccggtcggc
attctcagccgggcggatatcgtcttgccgaacgaatttcaggcgctgcacgccaatttc
ccgccggagcggccggtgccgacgctgatcgcccggctgtttgagctgccgatccaaatt
tccgtgccgctctattcgctggagcgggtgccggccaaccagcagccgctggcctatctg
gtgctgcaggccgattcgttccgcatgtaccagtttatccgcagcattttgtcgaccatg
ctatcgacctacctgctgttggcgctgatcctgtcggtggccatcacctggtgcatgaac
cggttgatggtgcatccgctgcgcgcgatggccaaagagctggaaaacatctcgcaggac
gaagcgccctaccaccagctgatgctgccgacgctgcaccaggacgacgagctcggcctg
ctggtgcgcaactacaaccgtaatcaacagacgctggccaaggcgcatgccgacatgagc
cgcctgagcacccgccatccggtgaccgaactgccgaatccggcattgctgaacgcgttg
ctggaacagcatatcgcctccagcctgcgccccgagcgttttaacctgctggtgatcggc
atcgagacgctgcatgaagcctcgggcgtgatgagcccggcgatgcgtgaagcgctgctg
ttggcgctggcgaagaagctgcgcggctgcatcgacgaaaacggcgtgctggcgcagctg
agcaataccgaattcgccatcctggccaaggggaccgagcggccgttccacgccatgcag
ctggcgcgacgcatcatggcggagatcaacgcgcccttgaccctggaaggtctggcgctg
cggcccaacgccagcatcggcatcgcgcactacctcaatcagggggaaagtgcggaacag
ctgctgcgcagcgccacctcggcgatgatgtccgcccaccgtgaaggaaaaaatcagatc
ctgttcttcgagcccagcctgacggagcgcacgcagaagcggctgacgcaggagagcgag
attttgcacggcatcgagcagcggcattttacgctgttcctgcagccgcagatcgacatg
cagtccaacgaggtgatcggcgccgaagcgctgctgcgttggcagcagtatgacggcagc
tataccctgccggccgacgttatcccgctcgcggaagagctgggcgtgatcgtgcctctc
ggcaactgggtgctggaagagtcctgccgcatcctggcggattggcagcaacgcggcatt
gcgctgccgctggcggtcaacgtttccggtatacagatgcagcatgaggcgttcgtcccg
catctgaaaaacctgctggcgcagtatcggatagacccgcgcaagctgctgttggagatc
accgagacggtgcgcatcgacgatctcgaccgcgcgctggcgctgctgcgcgagttgcac
gatctgggattgtcgatcgcgcttgacgacttcggcatgggctactccagtctggaatac
ctgaaccgcttgaaatccctgccgatcgatttgattaaaatcgaccgcagcttcattcag
gggctgccggccgacgatgcgatggtgcgcattgtcagtgcgatctccgaagtgctggcg
ttgccggtgatggccgaaggcgtggaaaacgccgagcagcgcgactgcctgctgcagcac
ggcattcgcagcgggcaaggattcctgttcgcccggccgctgccgcgcgcagcgttcgaa
gccgagttttgccgcgcggcgccgtaa
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