Serratia sarumanii: SSARUM_000933
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Entry
SSARUM_000933 CDS
T10280
Symbol
sbcC
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ssar Serratia sarumanii
Brite
KEGG Orthology (KO) [BR:
ssar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssar03400
]
SSARUM_000933 (sbcC)
DNA repair and recombination proteins [BR:
ssar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SSARUM_000933 (sbcC)
Archaeal homologous recombinant proteins
SSARUM_000933 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
cobW
nSTAND3
AAA_21
Gmx_para_CXXCG
TsaE
GTP_EFTU
NTPase_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WGZ63836
LinkDB
All DBs
Position
complement(995939..999190)
Genome browser
AA seq
1083 aa
AA seq
DB search
MKILSLRLKNLNSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR
LNVTPSQNELMTRHTAESLAEVEFEVKGVGYRAFWSQRRAKNAPDGNLQAPKVELARRED
GKILADKVRDKLEITAAITGLDFGRFTKSMMLSQGQFAAFLNADANDRAELLEELTGTEI
YGRLSEQVFESHKQAKTDLDGLHQRASGIELLNDEQRHSLTEQLTALSAQESALGKQTQQ
QQQALSWLQQWQRLQQQQNEGQRRLETAQREQAEAAPQLQRLALSEPAEKLRPLRGERDR
CRAELQTIQQQAAQLTQQQEQHSAQLAPLQQAVEKARLAQQAHAEHMRQQQQLIDDQVAP
LDHQIAQLQSTQAERRQAGDAAAQQCAKQKTTLEQLTAERSQLTAQAAQHQQQLNALTEA
LAVQQQQQQALAAQTPLAPLRQRLSALADLRPTRQQLFTLASLSQQVVKRLEQQRQELNI
GQNELTQLEPQLELIRQQFKQQKAHQADVEKTYALEQRIVGLEAERARLQPGAPCPLCGS
CEHPAVEQYQEVKLSETAQRLEQMKVQTEALQKQGVELRARYDNLQQQLQRQQQAIAQDE
QQLAAQQQQWQQLSAPLAFDFTLAEGERLSAWLSGCDDEERRGQHALQQHEQAAQAVQQA
KDALAALQTQQQQAQQRLALLEERFTLLQKTHADSLQQQQDLQQRWQEGEKTLAERRAQR
LALFGEQQVAEVREQLRAKQTACEQASLQAAEQWQKAQELRERLAGQQAGLQQQHTQMQE
RLQQAQQLWQQALADSEFADETAFAAALLDDALRRELQQRKEQLQQRQVEAAALLTQATQ
TLEQHRQSRPEGVDEANADLDALTQSLAELAQQLKTLQLRQGELRNQLESDAARRLNQQA
LFEQIVRSQQDYDDWSYLNQLIGSKEGDKFRRFAQGLTLDHLVYLANLQLGRLHGRYLLQ
RKTSDALELQVVDTWQADALRDTRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEG
FGTLDAETLDTALDALDSLNASGKTIGVISHVEAMKERIPVQIKVKKVNGLGVSRLEAHF
RLE
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctcagcctgaggttaaaaaacctcaactcgctgcagggcgagtggaaaatt
gacttcaccgccgagccgttcgccagcaacggcctgttcgccattaccggcccgaccggc
gcgggcaaaaccaccctgctggacgccatctgcctggcgctgtaccaccagacgccgcgt
ctcaacgtcacgccgagccagaatgaactgatgacccgccacaccgccgaatcgctggcg
gaggtcgaattcgaggtcaagggcgtcggctatcgcgccttctggagccagcgccgcgcc
aaaaacgcgccggacggcaacctgcaggcgccgaaggtggaactggcgcgccgcgaggac
ggcaagatcctggcggacaaggtgcgcgacaagctggagatcaccgccgccatcaccggg
ctggacttcggccgcttcaccaaatcgatgatgctgtctcaggggcagttcgccgcgttc
ctcaacgccgacgccaacgatcgcgccgaactgttggaagagctgaccggcaccgaaatc
tacgggcggctgtccgaacaggtgttcgaatcgcacaagcaggccaaaaccgacctggat
gggttgcaccagcgcgccagcggcatcgagctgctgaacgatgaacagcgccactccctg
actgaacagctgacggcgctgagcgcgcaggaaagcgccctcggtaagcaaactcagcaa
cagcaacaggcgctgagctggctgcagcaatggcaacgcctccagcaacagcaaaacgag
ggtcaacggcggctggaaaccgcccagcgcgagcaggccgaggccgccccgcagctgcag
cggctggcgctcagcgaaccggccgagaaattgcggccgctgcgcggtgaacgcgatcgc
tgccgcgccgagctgcagacgatacaacagcaggcagcccagctgacgcagcaacaggaa
cagcactcggcgcagttggcgccgctgcagcaggcggtggaaaaggcccgtctggcgcag
caagcccatgccgagcatatgcggcaacaacaacagctgatcgatgaccaggtcgccccg
ctcgaccatcagatcgcccaactgcagtcgacgcaggccgagcggcgacaggccggcgat
gccgccgcgcagcagtgtgccaaacagaaaaccacgctggagcagctcaccgccgagcgc
agccagctgacggcgcaggccgcacagcatcagcagcagttgaacgcgctgaccgaagcg
ctggccgttcagcaacaacagcagcaggcgctggcggcgcaaacgccgctggccccgctg
cgccagcgcctgagcgccctggcggatctgcgcccgacgcgccagcagttatttacgctc
gcctctttatcgcaacaagttgttaaacggctggaacagcagcggcaagagctaaacatc
ggtcaaaatgaactgacccagttggagccacagttagagctcatccgtcagcaatttaag
cagcagaaagcccaccaggccgatgttgaaaaaacctatgcgctggaacaacggatcgtg
ggtctggaagccgagcgcgcccgtttgcaacccggcgccccctgcccgctgtgcggctca
tgcgagcacccggcggtagaacaataccaagaggtaaaactgtcagaaactgcgcaacgt
ctggagcaaatgaaagtccagaccgaagcattgcaaaaacaaggcgtcgagctgcgagcc
cgttacgacaacctgcaacagcaattgcaacgccaacagcaggctatcgcgcaggatgag
cagcagctggctgcccaacagcagcagtggcagcagctcagcgcgccgctggcattcgac
tttacgttggccgagggcgagcggctcagcgcctggctaagcggctgcgacgatgaagag
cggcgcgggcaacacgcgctgcagcagcatgaacaggcggcgcaggcggtacagcaggcg
aaagacgcgctcgccgctctgcaaacgcagcagcagcaggcgcagcaacggctggcgctg
ctcgaagagcgctttacgctgctgcagaaaacccatgccgacagcctgcaacagcagcaa
gacctgcaacaacgctggcaagaaggcgagaagaccctcgccgaacggcgcgcgcagcgg
ctggcgctgttcggcgaacagcaggtcgccgaggtgcgcgaacagctgcgcgccaaacaa
accgcctgtgagcaggccagcttgcaggccgccgagcagtggcaaaaagcgcaggaactg
cgcgagcgcctggccggccagcaggccggattgcaacaacagcacacccaaatgcaggaa
cggctgcagcaggcgcagcagctgtggcagcaggcgctggccgacagcgaattcgccgat
gaaaccgccttcgccgctgcgttgctggacgacgccctgcgccgcgaattgcagcagcgc
aaagagcaactgcaacagcgccaggtggaggccgccgccctgctgacgcaggcgacgcaa
acgctggagcagcatcggcaaagccgccctgaaggggtggatgaagccaacgcggatctc
gacgcactcacccaatcgctggccgagctggcacagcagttgaaaacgttgcagctgcgc
cagggtgaactgcgcaaccagctggaaagcgacgccgcccgccgcctcaatcaacaggcg
ctgttcgagcaaatcgtccgcagccagcaagactacgacgactggagctacctcaaccag
ctgatcggctcgaaagaaggcgacaagttccgccgcttcgctcaggggctgacgctcgat
catctggtttatctggccaaccttcagctcggccggctgcacgggcgctacctgctgcag
cgcaaaaccagcgacgcgctggagctgcaggtggtggacacctggcaggccgacgcgctg
cgcgatacccgtactctgtccggcggcgagagcttcctggtcagcctggcgctggcactg
gcgttgtccgatctggtcagccacaaaaccagcatcgattcgctgttcctcgacgaaggc
ttcggcacgctggacgccgaaaccctcgataccgcgctggacgcgctggacagcctgaac
gcctccggcaaaaccattggcgtgatcagccacgtcgaggcgatgaaagagcgtattccg
gtgcagatcaaggtgaaaaaggtcaacgggctcggcgtcagccggctggaggcgcacttc
aggctggaatga
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integrated database retrieval system
