Serratia sarumanii: SSARUM_001394
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Entry
SSARUM_001394 CDS
T10280
Symbol
prpR
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
ssar Serratia sarumanii
Brite
KEGG Orthology (KO) [BR:
ssar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssar03000
]
SSARUM_001394 (prpR)
Transcription factors [BR:
ssar03000
]
Prokaryotic type
Helix-turn-helix
Other families
SSARUM_001394 (prpR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
Mg_chelatase
AAA_5
HTH_30
AAA_3
HTH_psq
Xre-like-HTH
AAA
HTH_23
AAA_16
HTH_1
AAA_2
HTH_Tnp_ISL3
HTH_24
HTH_AsnC-type
HTH_29
Motif
Other DBs
NCBI-ProteinID:
WGZ64265
LinkDB
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Position
complement(1455621..1457210)
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AA seq
529 aa
AA seq
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MSDHVTPDKPVIWTVSITRLFDLFRDISLEFDHLATIIPIRLGFEEAVQHIRARLATEPC
DAIIAAGSNGAYLKSRLSVPVILVKPGGFDLLQALSKARRTADRIGVITYKTPLPALLEF
QQTFDLPLEQRSYVTEEDARGQIAELKAAGIQAVVGAGLISELAEEAGLTAIFLYSAATL
RAAFSDALDVTRLMLGGGKRGGDYAARNTLQPRYGLSDLQGDSPQMEQTRRTIMLYARSP
AAVLIEGETGTGKELAAQAIHREYFSRRGAPARGATPPFVAINCGAIAESLLEAELFGYE
EGAFTGSRRGGRRGLLETANGGTLFLDEIGEMPLHLQTRLLRALEEKAVTRVGGQQPVAV
DFRVISATHNHLEQAIQRGGFRADLFYRLSALRLQLPPLRARGDDIAMLAEHFLKRSLAA
LDVPLTEPLRAALAGCYATLSHYAWPGNLRELRNMMERVALMLSTGTAPSGETLRWLLPE
LAAATPPETPPAPVSAHEALARCGGDHAAAARLLGISRTTLWRRLKKTN
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcacgtcacgccggacaaaccggtgatctggaccgtctccatcacccgcctg
ttcgatctgttccgagacatcagcctcgagttcgaccatctggcgaccatcatcccgatc
cgcctcggctttgaggaggcggtgcagcacatccgcgcccgcctggctaccgagccttgc
gacgccatcatcgccgccggctccaacggcgcctacctgaaaagccgcctgtcggtgccg
gtcatcctggtcaagcccggcggcttcgacctgctgcaggcgctgagcaaggcgcgcaga
accgccgatcggatcggcgtcatcacctataaaacccctctgcccgcgctgctggagttc
cagcagaccttcgatctgccgctggagcagcgcagctacgtcaccgaagaggacgcgcgc
ggccagatcgccgagctgaaagccgccggcattcaggccgtggttggagcgggcctcatc
agcgagttggcggaagaggccgggctcaccgccatttttctctattccgccgccaccctg
cgcgccgccttcagcgatgcgctggacgtgacgcgcctgatgctgggcggcggcaaacgc
ggcggcgattacgccgcgcgcaataccctgcagccgcgctacgggctgagcgatttgcaa
ggcgactccccgcagatggagcagacgcggcgcaccatcatgctgtacgcccgctcgccg
gcggcggtattaattgagggagaaaccggcaccggcaaggagctggcggcgcaggcgatc
caccgggaatacttttcccggcgcggcgcgccggccagaggcgcgacgccgccgttcgtc
gccatcaactgcggcgccatagccgaatcgctgctggaggcggagctgttcggctatgag
gaaggcgcctttaccggctcacggcgcggcggccggcgcgggctgttggaaaccgccaac
ggcggcaccctgtttctggatgagatcggcgaaatgccgctgcacctgcaaacccggctg
ctgcgcgcgctggaagagaaggccgtcacccgggtcggcgggcagcagccggtggcggtc
gactttcgcgtcatcagcgccacccacaaccacctggagcaggcgattcaacggggcggc
tttcgcgccgatctgttctaccgcctgagcgccctgcggctgcagctgccgccattgcgg
gcgcgcggcgacgatatcgcgatgctggcggaacactttctgaagcggtcgctggcggcg
ctcgacgtgccgctgacggagccgctgcgcgccgccctggccggctgttacgccacgctg
agtcattacgcctggcccggcaacctgcgcgaactgcgcaacatgatggagcgggtggcg
ctgatgctgagcaccggcaccgcgccgagcggcgagacgctgcgctggctgctgccggag
ctggcggcggccacgccgcccgagacgccgccagcgcccgtctccgcccacgaagcgctg
gcgcgatgcggaggcgaccacgccgccgccgcccgattgctcgggatcagccgcaccacc
ttatggcgccggctgaaaaaaacgaactga
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