Serratia sarumanii: SSARUM_002496
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Entry
SSARUM_002496 CDS
T10280
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
ssar Serratia sarumanii
Brite
Enzymes [BR:
ssar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SSARUM_002496 (hrpA)
Messenger RNA biogenesis [BR:
ssar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SSARUM_002496 (hrpA)
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GFIT
Other DBs
NCBI-ProteinID:
WGZ60808
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Position
complement(2621846..2625733)
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AA seq
1295 aa
AA seq
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MKSPLEALPAQLGELMLRDQQRLRRRLQGARKIKNPDAQLAVAAEVESDIAAARQKVQAR
AASCPRITYPESLPVSQKKQDILNAVRDHQVVIVAGETGSGKTTQLPKICLELGRGVKGL
IGHTQPRRLAARTVANRIADELETPLGGSVGYKVRFNDQVGENTLVKLMTDGILLAEIQQ
DRLLMQYDTLIIDEAHERSLNIDFILGYLRELLPKRPDLKVIITSATIDPQRFSRHFNNA
PIIEVSGRTYPVEVRYRPVVDDGDDTDRDQLQAIFDAVDELGREGPGDILIFMSGEREIR
DTADALNRLNLPHTEVLPLYARLSNSEQNRVFQSHHGRRIVLATNVAETSLTVPGIKYVI
DPGTARISRYSFRTKVQRLPIEPVSQASANQRKGRCGRVSEGVCIRLYSEQDFLSRPAFT
DPEILRTNLASVILQMTSLGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAIATADNGHYQ
LTPQGRQLAQLPIDPRLARMVLEAQKSGSVREVMIITAALSIQDPRERPMDKQQASDEKH
RRFADKDSDFLAFVNLWDYLQEQQKANSSSQFRRLCRNDFLNYLRVREWQDIYTQLRQVV
KELGLPINSTPSDYRSVHTALLTGLLSHIGQKDADKQEYTGARNARFSIFPGSGLFKKPP
KWTMVAELVETSRLWGRIAARIEPEWIEPLAQHLVKHSYSEPHWSKSQGAVMASEKVTLF
GLPIVAARQVNYGSIDPLLCRELFIRHALVEGDWQTRHAFFRDNQKLRAEVEELEHKSRR
RDILVDDETLFGFYDRRLPNDVVSGRHFDSWWKSAAKQQPDLLNFEKEMLIKDGANKISA
LDYPNFWHQGNLKLRLSYQFEPGTDADGVTVHIPLPILNQVEEQGFEWQIPGIRRELVIA
LIKSLPKPVRRNFVPAPNYAEAFLGRVTALELPLLDALERELRRMTGVTVSRDDWQWDQV
PDHLKMTFRVVGEKNQTLREGKDLAALRLQLKEKVQETLSAVADDGLEQSNLHVWSFGQL
PAFYEQKRGGYSMKAYPALVDEKDSVAIRLFDSESEQQQAMWQGTRRLLLLNIPSPIKYL
HEKLPNKAKLGLYFNPYGKVLELIDDCISCGIDKLIAEHGGPVWQEEGFARLQEQIRAEL
NDTVVEVARQVEQILTAVFNINKRLKGRVDMSLALALSDIKTQLGGLVYRGFVTGNGWKR
LPDTLRYLQAIERRLEKLAIDPHRDRAQMLRVEQVQQAWQQWLNKLPPKRQQEEEVKAVR
WMIEELRVSLFAQQLGTPYPISDKRIMQTIEQLSG
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
gtgaaatctccgctcgaggcactgccggcccaactgggtgagctgatgctccgcgatcaa
caacgtctgcgtcgtcgcctgcagggcgcacgaaaaatcaaaaatcccgatgcccagttg
gcggtggccgccgaagtagaaagcgacatcgcggcggcgcgtcaaaaagtgcaggcgcgc
gccgcgtcttgcccgcgcattacctatccggaaagcctgccggtcagccaaaaaaagcag
gacatattaaacgccgtccgcgatcaccaggtggtgattgtcgccggggagaccggctcg
gggaaaaccacccagctgccgaagatctgcctggaactggggcgcggggtgaaagggctg
atcggccatacccagccgcgccgcctggcggcgcgcaccgtcgccaaccgcatcgccgac
gagctggaaaccccgctcggcggcagcgtcggctacaaggtgcgcttcaacgatcaggta
ggagaaaataccctggtcaagctgatgaccgacggtatcttgctggcggaaattcagcag
gaccgcctgctgatgcagtacgacacgctgatcatcgatgaagcgcacgagcgcagcctc
aacatcgactttattctcggctacctgcgcgaactgctgccgaagcgcccggatctcaag
gtgatcatcacctcggcgaccatcgatccgcagcgcttctcgcgccatttcaacaatgcg
ccaatcatcgaggtttccggccgcacctacccggtggaggtgcgctaccgcccggtggtc
gacgacggcgacgataccgatcgcgaccagctgcaggcgattttcgatgcggtggacgag
cttggccgcgaagggccgggcgacattctgatcttcatgagcggcgagcgcgagatccgc
gataccgccgacgccctgaaccgcctcaatctgccgcacaccgaggtgctgccgctgtat
gcacgcctgtcgaacagcgagcagaaccgggtgttccagtcgcaccacggccgccgcatc
gtgctggccaccaacgtggcggaaacctcgctgacggtgccgggcatcaagtacgtcatc
gatccgggcaccgcgcgcatcagccgctacagcttccgcaccaaggtgcagcgcctgccg
atcgaaccggtgtcgcaggcttctgccaaccagcgtaaagggcgctgcggccgcgtatcg
gaaggggtgtgcatccgcctgtactccgagcaggatttcctgtcgcggccggcgtttacc
gatccggaaattctgcgcaccaacctggcttcggtcattctgcagatgacctcgctgggg
ctgggcgacattgccgcgtttccgttcgtcgaggcgccggacaagcgcaacattcaggat
ggcgtgcgcctgctggaagagctgggggcgatcgccaccgccgacaacggccactatcag
ctgacgccgcagggccgccagctggcgcagttgccgatcgacccgcgtctggcgcgcatg
gtgctggaagcgcagaagagcggcagcgtgcgcgaggtgatgatcatcaccgccgcgctg
tcgattcaggatccgcgtgagcgcccgatggacaagcagcaggcctcggatgaaaaacac
cgccgcttcgccgacaaggactcggacttcctggcgttcgtcaacctgtgggattatctg
caggagcagcaaaaagcgaactcctccagccagttccgccggctatgccgcaacgatttc
ctcaactacctgcgggtgcgcgagtggcaggatatctacacccagctgcgccaggtggtg
aaagagctggggctgccgatcaacagcacgccttccgactaccgcagcgtgcacaccgcg
ctgctgaccggcctgctgtcgcacattggtcagaaggatgcggacaagcaggaatacacc
ggcgcacgcaacgcccgcttctccatcttccccggctccggcctgttcaagaagccgccg
aagtggaccatggtggccgaactggtggaaaccagccgcctgtgggggcgtatcgctgcg
cgcatcgaaccggaatggatcgaaccgctggctcagcacctggtgaaacacagctacagc
gaaccgcactggtcgaagtcgcagggggcggtgatggccagcgaaaaggtcacgctgttc
ggcctgccgatcgtcgcggcgcgccaggtcaattacggctccattgatccgctgctgtgc
cgtgagctgtttattcgccatgcgctggtggagggcgactggcagacgcgccacgccttc
ttccgcgacaaccaaaagctgcgcgccgaagtggaggagctggagcataaatcacgccgc
cgcgacatcctggtggatgacgaaacgctgttcggcttctacgatcgccgtctccccaac
gacgtggtttccggccgtcatttcgacagttggtggaagagcgcggccaaacagcagccg
gatctgctgaacttcgaaaaagagatgctgatcaaggacggcgccaataagatcagcgcg
ctcgattacccgaacttttggcatcagggcaacctcaagctgcggctgagctaccagttt
gaaccgggcaccgacgccgacggcgtgacggtgcacattccgctgccgatcctcaaccag
gtggaggagcagggcttcgaatggcagatccccggcatccgccgcgagctggtgattgcg
ctgatcaaatcgttgccgaaaccggtgcgccgcaacttcgtgccggcgccgaactacgcc
gaggcgttccttggccgcgtcactgcgctggaattgccgctgctggacgcgctggagcgc
gagctgcggcgcatgactggcgtgaccgtgtcacgtgatgactggcagtgggatcaggta
cccgatcacctgaagatgaccttccgcgtggtgggcgagaaaaatcagacgctgcgcgaa
ggcaaagacctggccgcgttgcgcctgcagctgaaagagaaggtgcaggagacgctgtcg
gcggtggccgacgatgggcttgagcagagcaatctgcatgtctggagctttggccaactg
ccggcgttttacgagcagaagcgcggcggctattcgatgaaggcttacccggcgttggtg
gatgaaaaggacagcgtggcgatccgcctgttcgacagcgaaagcgagcagcaacaggcg
atgtggcagggcacgcgccgcctgctgttgctgaatattccttcgccgatcaaatacctg
catgaaaagctgccgaacaaggccaagctggggctctacttcaacccgtacggcaaggtg
cttgagctgattgacgattgcatttcgtgcggtatcgacaagctgatcgccgaacacggc
ggcccggtctggcaagaggaaggctttgcgcgcctgcaggagcagatccgcgccgagctg
aacgacacggtcgtcgaggtggccaggcaggttgagcagatcctgacggcggtcttcaac
atcaacaaacggctgaaaggccgggtggacatgtccttggcgctggcgttgtcggacatc
aaaacccagcttggcggcctggtttaccgcggtttcgtcaccggcaacggctggaaacgc
ctgccggacacgctgcgctacctgcaggcgatcgaacgccgattggaaaaactggccatc
gatccgcatcgcgatcgcgcgcagatgctgcgggttgagcaggtgcagcaggcgtggcag
cagtggctgaacaagctgccgccaaagcggcagcaggaggaagaggtgaaagcggtgcgc
tggatgatcgaagagctgcgcgtcagcctgttcgcgcagcagctgggcacgccgtacccg
atctccgacaagcgcattatgcaaactatcgagcagctttcgggctaa
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