Serratia sarumanii: SSARUM_003191
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Entry
SSARUM_003191 CDS
T10280
Symbol
nfo
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
ssar Serratia sarumanii
Pathway
ssar03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SSARUM_003191 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssar03400
]
SSARUM_003191 (nfo)
Enzymes [BR:
ssar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
SSARUM_003191 (nfo)
DNA repair and recombination proteins [BR:
ssar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SSARUM_003191 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
WGZ61464
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All DBs
Position
3353611..3354450
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AA seq
279 aa
AA seq
DB search
MKFVGAHVSASGGVDQAVIRAHELEATAFALFTKNQRQWKAAPLAADVIDKFKSACAQYG
FGPGQILPHDSYLINLGHPVADALEKSREAFIDELQRCEQLGLTLLNFHPGSHLLQIDED
KCLARIAESINIALDKTAGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT
CHAFAAGYDLRTEEDCEHTFKQLGDIVGFNYLRGMHLNDAKSEFNSRVDRHHSLGEGNIG
KTVFSYIMRDPRFDNIPLILETVNPDIWAEEIAWLKAQQ
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgtcggtgcacatgtcagcgcgtcaggcggcgtggatcaggcggttatccgc
gcgcacgaattggaggcgaccgcgttcgctctgttcaccaaaaatcagcgtcaatggaag
gccgcgccgctggccgcggacgtgatcgataagttcaagagcgcctgcgcccagtacggc
ttcgggccggggcagatcctgccgcacgacagctacctgatcaacctgggccacccggtg
gccgacgcgttggaaaaatcgcgcgaggcgttcatcgacgagctgcagcgctgcgaacag
ctggggctgacgctgctgaacttccaccccggcagccacctgctgcaaatcgatgaagac
aagtgcctggcgcgcatcgccgaatcgatcaacatcgcgctggataaaaccgccggcgtg
acggccgtgatcgaaaacaccgccggccagggcagcaacctgggcttcaaattcgagcac
ctggcggcgatcatcgacggcgtggaagacaaaagccgcgtcggcgtttgcatcgacacc
tgtcacgccttcgccgccgggtacgatctgcgcaccgaagaagactgcgaacacaccttc
aaacagctcggcgacatcgtcggcttcaactacctgcgcggcatgcacctgaacgacgcc
aagagcgagttcaacagccgcgtcgaccgccaccacagcctgggggaaggcaacatcggc
aaaacggtgttcagctacatcatgcgcgatccgcgcttcgacaatatcccgctgattctg
gaaacggtaaacccggatatctgggcggaagagatcgcctggctgaaagcgcagcagtaa
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