Serratia sarumanii: SSARUM_003801
Help
Entry
SSARUM_003801 CDS
T10280
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
ssar Serratia sarumanii
Pathway
ssar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SSARUM_003801 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssar03400
]
SSARUM_003801 (recB)
Enzymes [BR:
ssar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SSARUM_003801 (recB)
DNA repair and recombination proteins [BR:
ssar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SSARUM_003801 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
WGZ62030
LinkDB
All DBs
Position
complement(3998649..4002200)
Genome browser
AA seq
1183 aa
AA seq
DB search
MTETAPQRLEPLTLPLFGERLIEASAGTGKTFTIGALYLRLLLGLGGEAAFPRPLTVEEI
LVVTFTEAATEELRGRIRDNIHGLRIACVRGVSANPLFSALMAEIDDLTDAASQLLAAER
QMDEAAIYTIHGFCQRMLTHNAFESGMLFEQTLVQDELPLRRQACADFWRRHCYPLPLGV
ARAVSQEWSGPEALLADLSGYLHGEAPALRRPPKDEETVLMRHEQIVARIDAIKAQWRAA
AGDLEALIAQSGVDKRSYSSKHLPNWLNKVGEWSGQETQDYQLPKELDKFRQSVLLDKTK
KGEPPRHALFTAIDELFDEPLTLRDLIMARALSEIRTSIQQEKRQRAELGFDDLLSRLDG
ALQSGGGEQLAQAIRQRYPVAMIDEFQDTDPQQYRIFQKLYVGRPDCGLLLIGDPKQAIY
AFRGADIFTYMRARSEVSAHYTLETNWRSSPSMVASVNHLFSQVEKPFLFGQIPFIEVSA
AEKNQGLAFDLHGKPQPAMQFWLQQGEGAGVSDYQQLMARLCATQIRDWLSAGQQGQAWL
QGGKEPRPVQASDITVLVRSRNEAALVRDALSALSIPSVYLSNRDSVFDTPEAKDLLWLL
QAVLAPEQERTLRSAMATGLMGLDAPTLDGLSRDERAWDELVNEFDDYRTLWLRRGVLPM
LSEVMKARQLAENLLASAGGERRLTDVLHLGELLQEAAAQLDSEHALVRWLAQQIAQPNR
QSDNQQLRLESDRHLVQVITIHKSKGLEFDLVWLPFVGNFRQQQQALYHDRHSFQALLDL
DANEESQAWAEEERLAEDLRLLYVALTRSVYHCSIGIAPLFQGTRKKQGDTDLHRSALGY
LVQGGQAGDAAYLQERLQQLAGGGIALSLVEPPDEAPWLPQASLAATLAAKSFTRRIQDF
WRVTSYTGLQQHGSSLMQDLLPRLDVDAAGERGEESEPALTPHTFPRGATPGTFLHSLFE
TLDFTQPLDEQWLLAQLQQQGFAEHWQPILLAWMQVLLNTPLAASGVTLSALTPQHKQAE
LQFYLPINRLLQAKALDALVKRYDPLSARCPALDFHQVQGMLKGFIDLVFCWQGKYYLLD
YKSNWLGEDSSAYTRPAMEQAMAEHRYDLQYQLYTLALHRYLRHRLPDYDYRRHFGGVIY
LFLRGVDAAHPGNGIFTCLPELELVEGMDRLFSGEAAATEEGS
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaactgccccgcagagactggagccgctgacgctgccgctgttcggcgaacgc
ctgatcgaggcgtcggcgggcaccggcaaaacctttaccatcggcgcgctgtacctgcgt
ttgctgctggggctgggcggtgaagcggcgtttcctcgcccgctgacggttgaagaaatc
ctggtggtgacctttaccgaggccgccaccgaggagctgcgcgggcgtatccgcgacaat
atccacgggctgcgcatcgcctgcgtgcggggcgtcagcgccaacccgctgttttcggcg
ctgatggctgaaattgacgatttgaccgacgccgcctcgcagctgctggcggcggagcgg
cagatggatgaagcggcgatctacaccattcacggcttttgccaacgaatgctgacgcac
aacgccttcgaatccggcatgctgtttgaacaaacgctggtgcaggacgagttgccgctg
cggcggcaggcctgtgctgatttctggcgtcgccactgctatccgttgccgctgggcgtg
gcgcgtgcggtcagccaggagtggagcggcccggaagcgttgctggccgacctttccggt
tacctgcacggtgaggcgccggcgctgcgccggccgccgaaggacgaagaaaccgtcctg
atgcgccacgagcagatcgtcgcgcgcatcgatgccatcaaggcgcaatggcgtgcggcg
gcgggcgatctggaggcgctgatcgcccagtccggcgtcgataagcgcagctacagcagc
aaacacctgccgaactggctgaacaaggtcggcgaatggagcgggcaggagacccaggac
taccagttgccgaaggaactggataaatttcgccagtcggtgctgctggataagaccaag
aaaggcgagccgccgcggcatgcgctgttcacggcgatcgacgagctgttcgatgaaccc
ttgacgctgcgcgacctgatcatggcgcgcgcgctcagcgagatccgcacttccattcaa
caagaaaagcgccagcgcgccgagctggggtttgacgacctgctcagccggctggacggc
gccctgcaaagcggcggcggcgaacagctggcgcaggcgatccgccagcgttacccggtg
gcgatgatcgatgaattccaggataccgatccgcagcaataccgcattttccaaaaactt
tacgtcggccggcccgattgcggcctgctgttgatcggcgatcccaagcaggcgatttac
gccttccgcggtgccgacatctttacctacatgcgggcgcgctcagaagtgagcgcccac
tatacgctggagaccaactggcgctcgtcgccgtcgatggtcgccagcgtcaatcacctg
ttttctcaggtagaaaagcctttcctgttcggccaaatcccctttatcgaggtcagcgcg
gcggaaaagaaccaagggttggcgtttgacctgcacggcaagccgcaaccggcgatgcag
ttctggctgcagcagggggaaggcgccggtgtaagtgattaccaacagttgatggcgcgc
ctgtgcgccacgcaaattcgcgactggctcagcgccgggcagcagggccaggcgtggctg
cagggcggcaaggagccaaggccggtacaagcttccgatatcacggtgctggtgcgcagc
cgcaatgaggcggcgctggtgcgcgatgcgctgagcgcgctgtccattccgtcggtctac
ctgtctaaccgcgacagcgtgttcgacaccccggaggccaaagacctgctgtggttgctg
caggcggtgttggcgccggagcaggagcgcacgctgcgcagcgccatggccaccgggctg
atggggctggacgcgccgacgctggacggcctgagccgcgatgagcgtgcctgggacgag
ctggttaacgaattcgatgattaccgcacgctctggctgcgccgcggcgtgctgccgatg
ctgagcgaggtgatgaaagcgcgccagctggcggagaacctgctggccagcgccggtggc
gagcgtcgtttgaccgacgtgctgcatctgggggagttgttgcaagaggcggcggcgcaa
ctcgacagcgaacatgcgctggtgcgctggctggcacagcagatcgcccagcctaatcgc
cagtccgataatcagcaactgcggctggagagcgaccggcatctggtgcaggtgatcacg
attcataaatccaaggggctggagttcgatctggtgtggctgccgttcgtcggcaatttc
cgccagcagcagcaggcgctgtatcacgatcgccacagtttccaggcgttgctggatctc
gacgccaatgaagagagccaggcctgggcggaggaagagcggttggcggaagacctgcgc
ctgttgtacgtggcgctgacccgctcggtgtaccactgcagcatcggtatcgcgccgctg
ttccagggcacgcgcaagaaacagggcgataccgatctgcaccgcagcgcattgggttat
ctggtgcagggcgggcaggccggcgacgccgcgtatctgcaggagcgcctgcagcaattg
gcgggcggcggcatcgcgctgtcgctggtggaaccgccggacgaggcgccctggctgccc
caggcatcgctggccgctacgctggcggcgaaaagctttacccgacggatccaggatttt
tggcgggtgaccagctataccggtttgcaacagcacggttcgagcctgatgcaggatctg
ctgccgcgtctggatgtcgacgccgcgggcgagcggggtgaggagagtgagccagcgctc
acaccgcataccttcccgcgcggcgcaacgcccggcaccttcctgcacagcctgtttgaa
acgctggacttcacccagccgctggacgaacagtggctgctggcacagctgcaacagcaa
ggatttgccgagcactggcagccaattttgctggcgtggatgcaggtgttgctcaacacg
ccgctcgccgccagcggcgtgacgttgtcggcgctgacgccgcagcacaagcaggccgag
ctgcagttctatttgccgattaaccggttgttgcaggcgaaggcgctcgatgccctggtg
aagcgttacgatccgctttccgcccgctgcccggcgctagattttcatcaggtgcagggc
atgctgaaaggctttatcgacctggtgttctgctggcagggcaaatactacctgctggac
tacaagtccaactggctgggggaagacagtagcgcctatacccggccggcgatggagcag
gcgatggcggagcatcgttacgatctgcaataccagctgtatacgctggcgctgcatcgt
tatctgcgtcatcggttgccggattacgattatcggcgccattttggcggggtgatttat
ctgttcctgcgcggcgtggatgcggcgcacccgggcaacggcattttcacctgtctcccc
gagcttgagctggtggaggggatggatcgcttgttcagcggcgaagctgcggcgacggag
gaaggatcatga
DBGET
integrated database retrieval system
