Serratia sarumanii: SSARUM_003986
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Entry
SSARUM_003986 CDS
T10280
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ssar Serratia sarumanii
Pathway
ssar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SSARUM_003986 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssar03019
]
SSARUM_003986 (pcnB)
Enzymes [BR:
ssar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
SSARUM_003986 (pcnB)
Messenger RNA biogenesis [BR:
ssar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SSARUM_003986 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
WGZ62202
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Position
4206933..4208249
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AA seq
438 aa
AA seq
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MTVIPREQHSISRKDISENALKVLYRLNKSGYEAYLVGGGVRDLLLGKKPKDFDITTNAT
PEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEQNPESDKNSSQQAQNGMLLR
DNIFGSIEEDAQRRDFTINSLYYGVADFTLRDYVGGLNDLKQGVIRLIGDPETRYREDPV
RMLRAVRFAAKLDMRISEETAEPIPRLASLLHEIPPARLFEESLKLLQAGYGFQTYLKLC
EYQLFQPLFPLIARNFTPNHDTPMERILVQVLKNTDHRLQNDMRVNPAFLFAAMLWYPLL
EHAQKLAQESGLAYYDAFALAMNDVLDEQCRSLAIPKRITTLVRDIWQLQLRLSRRQGKR
AHKLMEHPKFRAAYDLLALRAEVEDNQEMLRLAEWWGEFQDATPARQKAMLSTLGDDPAP
RRARQRRPRRRAPRKEGA
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgatcccgcgcgaacagcactcgatttcccgcaaagacattagcgaaaatgcg
ctgaaagtgctttaccgcctgaacaagtccggctacgaagcctatctggtcggcggcggc
gtgcgcgatctgttgctcggcaaaaagccgaaagactttgacatcaccaccaacgccacg
ccggagcaagtgcgcaagctgttccgcaactgccgcctggtcggccggcgcttccgcctg
gcgcacgtgatgttcgggccggaaatcatcgaagtggccactttccgcggccaccacgaa
cagaacccggaatccgacaagaactcgtctcagcaggcgcaaaacggcatgctgctgcgc
gacaacatcttcggttcgatcgaggaagacgcccagcgccgtgacttcaccatcaacagc
ctgtactacggcgtggcggatttcaccctgcgcgattacgtcggcggcctgaacgatctg
aaacagggcgtgattcgcctgatcggcgatccggaaacccgctaccgcgaagatccggtg
cgcatgctgcgcgcggtgcgcttcgccgccaagctggatatgcgcatcagcgaagagacc
gccgagccgatcccgcgcctggcctcgctgctgcatgagataccgccggcgcgcctgttc
gaagaatccctcaagctgctgcaggccggttacggtttccagacctacctgaagctgtgc
gaataccagctgttccaaccactgttcccgctgatcgcccgcaacttcacgccgaaccac
gatacgccgatggagcgcattctggtgcaggtgttgaagaacaccgatcaccgcctgcag
aacgacatgcgcgtcaacccggcgttcctgtttgccgccatgctgtggtacccgctgctg
gagcacgcgcagaagctggcgcaggaaagcggcctggcctactacgacgccttcgcgctg
gcgatgaacgacgtactcgacgagcagtgccgctcgctggccatcccgaaacgcattacc
acgctggtacgcgatatctggcaactgcagctgcgcctgtcccgccgccagggcaaacgc
gcgcacaagctgatggaacacccgaaattccgcgccgcctatgatctgctggcgctgcgt
gcagaagtggaagacaatcaggagatgctgcgtctggccgagtggtggggcgagttccag
gacgccacgccggcgcggcagaaagccatgctgagcaccctgggggacgatccggcgccg
cgccgcgcgcgtcaacgccgccctcgccgccgggcaccgcgtaaagaaggggcataa
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