Serratia sarumanii: SSARUM_004596
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Entry
SSARUM_004596 CDS
T10280
Symbol
pdeR
Name
(GenBank) cyclic di-GMP phosphodiesterase
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
ssar Serratia sarumanii
Pathway
ssar02024
Quorum sensing
Brite
Enzymes [BR:
ssar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
SSARUM_004596 (pdeR)
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NCBI-ProteinID:
WGZ62777
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Position
4862314..4864308
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AA seq
664 aa
AA seq
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MPADQGPELLNAHFGTQSPHWRLAFDSNALELSAVKGKAHVAVALSAMEAAKIRRLTGVT
ASLELTITLAGAPLHLHLVGRRVNNLEWAGTASAFSDTQSVARDLVHGLSFAEQVVSEAN
SVIVIVDQHGRIQRFNRLSEEYTGLHEHEVIGKNVFQLFMSPEEAAASRRNIAGFFRNGS
SYEVERWVKTVKGERLFLFRNKFVHSGSGKNEVFLICSGTDITEERRAQERLRVLANTDL
ITGLPNRNAIQDKINHAIATRGEESFGLVYLDLDNFKKVNDAYGHMFGDRLLVEVALAIL
GCLGPDQVLARLGGDEFLVLAPQADRERLQTLAQRIIDRLKTPFRIGLIEVYTGCSIGIA
LCPEHGNDLDSLIRSADTAMYVAKEHGKRTYTVFSPEMNKRVAEYMWLDTNLRKGLEQNQ
LVLYYQPKIDARSGEVHSVEALVRWDSPERGLIPPLQFISYAEESGLIGPLGQWVLQTAA
GQAAQWQEQGLNLRVAVNLSARQLADDSIVNDLLGVLRRHRMAPCLLDFELTESSLIEDE
NRARALITRLRELGAQVHLDDFGTGYSSLAQLARIPLDAIKLDKSFVRGVNFNPVSQSLV
RAIVAAAEALAFRVIAEGVETESENHFLDEVGVDEKQGFLFARPMLPEQLEHWLQSYRPR
SPSA
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcagaccaaggccctgagcttcttaacgcccacttcggcacccaaagcccccac
tggcggctggcgtttgacagcaatgccctggagctgtccgccgttaaaggcaaagcccac
gtcgcggtggcgctcagcgccatggaagcggcgaaaatccgtcgcctgaccggcgtcacc
gccagcctggagctgaccattacgctagccggtgcaccgctgcatctgcatctggtcggg
cgccgcgtcaacaacctcgaatgggcgggcaccgcttccgccttcagcgacacccaatct
gtggcgcgcgacctggtgcacggcctctccttcgccgagcaggtggtgtccgaagccaac
tcggtgatcgtgatcgtcgatcaacacggccgcattcagcgtttcaaccggctgagcgag
gagtataccgggctgcacgaacacgaggtgatcggcaaaaacgttttccagctgtttatg
agcccggaagaagccgccgcttcgcggcgcaacatcgccggcttcttccgcaacggttcg
tcctatgaggtggaacgctgggtaaagacggtcaagggcgaacggctgttcctgttccgc
aataagttcgtgcacagcggcagcggcaaaaacgaagtctttctgatctgctccggtacc
gacatcaccgaagaacgccgggcgcaggagcggctgcgggtgctggccaacaccgatctc
atcaccggcctgccgaaccgtaacgccatccaggacaagatcaatcacgccatcgccacg
cgcggcgaagagagtttcggcctggtgtacctcgatctggacaacttcaaaaaggtcaac
gacgcctacggccatatgttcggcgatcggctgctggtcgaggtcgcgctggcgatcctc
ggctgcctgggcccggaccaggtgctcgcccgcctcggcggcgacgaattcctggtgctg
gcaccgcaagccgatcgcgagcgcctgcaaacgctggcgcagcgcatcatcgacaggctg
aaaacccctttccgcatcggcctgattgaggtgtataccggctgttcgatcggcatcgcg
ctgtgcccggagcacggcaacgatctcgacagcctgatccgcagcgccgataccgccatg
tacgtcgccaaggagcacggcaaacgtacctataccgtcttctcgccggagatgaataaa
cgcgtcgccgaatacatgtggctggacaccaatctgcgcaaagggctggagcaaaatcag
ctggtgctgtattaccagccgaaaatcgacgcgcgcagcggtgaagtgcacagcgtggaa
gcgctggtgcgctgggattcgccggagcgcggcctgatcccgccgctgcagttcatttcc
tacgccgaggagtccggcctgatcggcccgctcggccaatgggtgctgcagaccgccgcc
gggcaggcggcgcagtggcaagaacagggcttaaatctgcgggtggcggtcaacctctct
gcccgtcagctggccgatgacagcatcgtcaacgacctgctcggggtgctgcgccgtcac
cgcatggccccctgtctgctggacttcgagttgaccgaaagcagtctgattgaagacgag
aaccgcgcgcgcgcgttgatcacccggctgcgcgaactgggcgcgcaggtgcatctcgac
gacttcggcaccggctattcgtcgctggcgcagctggcgcgcattcctctggacgccatc
aagctggataaaagcttcgtgcgcggggtgaatttcaacccggtatcgcaatcgttggtg
cgcgcgatcgttgcggcggcggaggcgttggcgttccgggtgatcgccgaaggggtggag
accgagagcgaaaaccacttcctcgacgaggtcggcgtggacgaaaaacagggctttctg
tttgcgcggccaatgctcccggaacagctggagcattggctgcagtcctatcgcccgcgc
tcaccctccgcatga
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