Sphingomonas sabuli: H8M03_00115
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Entry
H8M03_00115 CDS
T07540
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
ssau
Sphingomonas sabuli
Pathway
ssau03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ssau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H8M03_00115 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssau03400
]
H8M03_00115 (uvrA)
DNA repair and recombination proteins [BR:
ssau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H8M03_00115 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H8M03_00115 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
AAA_21
AAA_25
DnaJ_CXXCXGXG
ATPase
DUF4350
AAA_23
Motif
Other DBs
NCBI-ProteinID:
QNM82819
UniProt:
A0A7G9L2H0
LinkDB
All DBs
Position
complement(20371..23304)
Genome browser
AA seq
977 aa
AA seq
DB search
MLTHISVRGAREHNLKGVDVEIPRESLTVITGLSGSGKSSLAFDTIYAEGQRRYVESLSA
YARQFLEMMQKPDVEHIDGLSPAISIEQKTTSKNPRSTVATVTEIYDYMRLLFARVGIPY
SPATGLPIEAQQVSQMVDRTMALPEGSRHYLLSPVVRGRKGEYKKEMAEWQRAGFTRVRI
DGEFHDIEDAPALDKKYKHDIELVVDRVVIREGIEARLADSFETALKLADGLAYLDPADP
PADSEAKGGMKLDFGAPGRIVFSQRFACPVSGFTIAEIEPRLFSFNAPQGACPACDGLGE
KLVFDEDLVVPNHNISIAKGAVVPWAKSQPPSPYYMQVLSSLARAYGFSIDVPWGELPQE
AQRAILYGTGGKPVVLRFLDGRKSYEVKKPFEGVLANLERRYNQTESQWMKDELSRYQGS
RRCEVCDGARLKPEALSVKIAGEHISGAAMRSVADARDWFADLHTKLTDQQNAIAKAILK
EINERLGFLHNVGLDYLHLDRKSGTLSGGESQRIRLASQIGSGLSGVLYVLDEPSIGLHQ
KDNDRLLETLKRLRGLGNTVLVVEHDEDAIRTADHVIDMGPGAGVHGGEVVCAGTLDDLL
KCEDSITADYLSGRREIPVPAKRRKGNGKKVAVHGATANNLRGVTAYFPLGTFTAVTGVS
GSGKSSLTIDTLYAGAARALNGARILCGPCDKISGLEQLDKVIDIDQSPIGRTPRSNPAT
YTGAFTNIRDWFAGLPEAKARGYKPGRFSFNVKGGRCEACKGDGLLKIEMHFLPDVYVTC
DVCHGQRYNRETLEVKFKGKSIADVLDMTVEDAAEFFKAVPGIRDKMRMLQEVGLGYIKV
GQQATTLSGGEAQRVKLSKELSRRATGKTLYILDEPTTGLHFEDVRKLLEVLHRLVEQGN
TVVVIEHNLDVIKTADWVIDLGPGGGVNGGEIVVAGTPEKVAATDPSATGMYLKPLLERG
AAPAPAKKRQPDLIPAK
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgctcacgcatatttctgtaaggggtgcccgcgagcacaatctcaaaggggtcgatgtc
gagatcccgcgcgaaagcctgacggtcatcaccggcctgtcgggatcgggcaagtccagc
ctcgccttcgacaccatttatgcggaagggcagcggcgctacgtcgaaagcctcagcgct
tatgcgcgccagttcctggagatgatgcagaagccggatgtcgagcatatcgatggcttg
tcgccggccatctcgatcgagcagaagacgacgtccaagaacccgcggtccaccgtcgcg
accgtcaccgaaatctacgattacatgcgcctgctcttcgcgcgcgtcgggattccgtac
tcgccggccacagggctgccgatcgaggcgcagcaggtcagccagatggtcgaccgcacc
atggccctgcccgaaggcagccgccattatctcctcagccccgtcgttcgcggccgcaag
ggcgagtataaaaaggagatggccgaatggcagcgcgccggctttacccgcgtgcgcatc
gacggcgaattccacgacatcgaggacgcgccggcgctcgacaagaagtataagcacgac
atcgagctggtggtcgaccgcgtcgtcatccgcgaaggcatcgaggcgcggctcgccgac
agtttcgaaaccgcgctgaagctggccgacggcctcgcctatctggaccccgccgacccg
cccgcggacagcgaagccaaaggcggcatgaagctcgacttcggcgcgcccggccggatc
gtcttttcccagcgtttcgcctgccccgtcagcggcttcaccatcgccgagatcgaaccg
cggctgttctccttcaacgcgccgcagggcgcttgcccggcctgcgacggcctgggcgag
aaactggtgttcgacgaagatctcgtcgtgcccaatcataacatctcgattgccaagggc
gcggtcgtcccctgggccaagtcgcagccgccgagcccatattacatgcaggtgttgtcc
agcctagcccgcgcctatggcttttccatcgacgtgccgtggggcgagctgccgcaggag
gctcagcgtgccatcctttatggcaccggcggcaaaccggtcgtcctgcgctttcttgac
ggccgcaagagctatgaggtgaagaagccgttcgaaggcgtgctcgccaacctcgagcgg
cgctacaaccagaccgaatcccagtggatgaaggacgagctgtcccgctaccagggcagc
cgcaggtgcgaggtgtgcgacggcgcgcggctcaagcccgaagcgctatcggtgaagatc
gccggcgaacacatctcaggcgccgcgatgcgctcggtcgcggacgcccgcgactggttc
gccgaccttcacaccaagctgaccgaccagcagaacgccattgccaaggcgatcctgaag
gaaattaacgagcgcctcggcttccttcacaacgtcgggctcgattacctgcacctcgac
cgcaagtcgggcacgctgtcgggcggcgagagccagcgtattcgcctcgcgtcccagatc
ggcagcggtctttccggcgtgctctacgttctcgacgaaccgtcgatcggcctgcaccag
aaggacaacgaccgcctgctcgagacgctgaagcggttgcgcggactcggcaacaccgtg
ctggtcgtcgaacatgacgaggacgccattcgcacggccgaccatgtcatcgacatgggt
cccggcgccggcgtccacggcggtgaggtggtttgcgccggaacgctcgacgacctgctc
aagtgcgaggactcgatcaccgccgactatctctccggccgccgcgagatcccggttccg
gccaagcgccgcaagggcaacggcaagaaggtcgccgtccatggcgccaccgccaacaat
ttgcggggtgtcaccgcatatttcccgcttggcacctttaccgccgtcactggcgtatcg
ggcagcggcaagagctcgctgaccatcgacacgctctatgccggcgctgcccgcgcgttg
aacggcgcgcgcatcctgtgcggcccgtgcgacaagatcagcgggctcgaacagctcgac
aaggtcatcgacatcgaccagtcgccgatcggccgcaccccgcgctccaaccccgcgacc
tataccggcgccttcacaaacatccgcgactggttcgccggcctgcccgaagcgaaggcg
cgcggctacaagcccggccgcttctcctttaacgtcaagggcggccgctgcgaagcgtgc
aagggcgacggcctgctcaagatcgaaatgcacttcctccccgacgtctacgtcacttgc
gacgtctgccacggccagcgctacaaccgtgaaacgctggaggtgaagttcaagggcaag
agcatcgccgacgtgctcgacatgacggtcgaggacgcggcggaattcttcaaggcggtc
cccggcatccgcgacaagatgcgcatgctgcaggaagtgggcctgggctacatcaaggtc
gggcagcaggcgacgacgctaagcggcggcgaggcccagcgcgtgaaactatccaaggaa
ctgtcccgccgcgcgaccggcaagaccctctacatcctcgacgagcccaccaccggcctc
cacttcgaagacgtccgcaagctgctggaggtgctccaccgcttggtcgaacagggcaac
accgtggtcgtgatcgaacacaacctcgatgtcatcaaaacggcggactgggtgatcgac
cttggcccgggcggcggggtgaacggcggagagattgtggtcgcgggaacgccggagaag
gtggcggcgacggatccgtcggcgacagggatgtatttgaagccgctgctcgagcggggc
gccgcgcctgctcccgcaaagaagcgacaacccgacctgatccccgccaagtaa
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