Sphingomonas sabuli: H8M03_01800
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Entry
H8M03_01800 CDS
T07540
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
ssau
Sphingomonas sabuli
Brite
KEGG Orthology (KO) [BR:
ssau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssau03400
]
H8M03_01800 (addB)
Enzymes [BR:
ssau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H8M03_01800 (addB)
DNA repair and recombination proteins [BR:
ssau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
H8M03_01800 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QNM83120
UniProt:
A0A7G9L3C1
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All DBs
Position
353858..356788
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AA seq
976 aa
AA seq
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MPDRAADSLRHPAVYTIPTHRSFADSLVAGLIARFGRDPLLLAGGRILLPNNRAVRTVTD
AFVRASGSGLVLPRLIPVGDAELEERIGGALDPADMADPVPPAVEPLQRLLALADLVRAG
DESAVEALRLSADLSRTLDALLVEQVDPSRLAGVAQDSEELASHWQVSLDRLRAILILWP
EKLRDWNRIDLADRRNRLLERLADRWATDPPVGFTVAAGITTTAPAIATLLKRIATLPDG
MVVLPGLARATSVPDEEWDALGPDDSGRGEETHPQFHLKLLLDRIGVARDEVRLWPRVGS
AASTPLRARAVANAFVSAQFSDKWIGLKPAERRLSGIRTAVLPDTAAEAQAIALAIRETL
ETPGKTAALVTPDRMLARRVSALLARWSIHADDSAGTPLSERPPGTLLLSLAAAMAEELA
PVSLLALLKHPLVGGEEDARRTWLDDVRLLDVALRGPRPAAGLHGLDRHFAEREAEDRNC
RGCVDAWHRVRSRLEPLDGQGAPTTLAAFVARLVTAAGVLAGDRGWRGQDGRMLAELLAE
LEASAEAQRLPVGPEDAVAVLAELLAGRSVRPPYGDHPRVFIWGLLEARLQQADLMILAG
LNEGVWPAVPAPDPWLAPRIRGKLGLPGLDFRIGLSAHDFASALGAREVLITRSKRDGRS
PTVASRFLLRLEAISGGLPRDYRLERLTAALDDPGEPVPVRRPQPRPPAADRPKRISVTA
VDRLKADPFAFYAQAMLRLRALDPVDADHTARWKGSAVHKVFEDWLKQDECDPDRLRPRA
EALLADETIHPMLRALWAPRLLEAIDWMADLERSNRASGRAPLVAEAKGEAAIAGITVHG
IADRIDRLAGTSLAIIDYKTGRPPAKKAIDAGFALQLGLLGLIARAGGFDGVTGDPQAFE
YWSLVRDRDQFGKCVHADKDMGPEEFLAHAFANFAEAAEKWLNGTEPFTAKLNPAFAPYG
DYDQLMRLEEWYGRND
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatcgcgccgcagacagcctgcggcaccccgccgtctacacgattccgacccat
cgctcctttgccgactcgcttgtcgcggggctgatcgcgcgcttcggccgcgatccgctg
ctgctggccggcggccgcatcctcctgcccaacaatcgcgcggtgcgcaccgtcaccgac
gccttcgtccgcgccagcggctcgggcctcgtcctgccgcgcctgatcccggtcggcgat
gctgaactggaagaacggatcggcggcgcgctcgaccccgcggacatggccgatccggtg
ccgcccgcggtggagccgctgcaacgtctgctggcgctcgcggatcttgttcgcgccggc
gacgaaagcgcggtcgaggcgctgcgcctgtccgcggacctgtcgcgaacgctggacgca
ctgctggtggaacaggttgacccgtcgcggctggccggcgtggcgcaggacagcgaggag
ctggcgtcgcactggcaagtatcgctcgaccggctgcgcgcgatcctcatcctgtggcct
gaaaagcttcgcgactggaatcgcatcgacctggccgaccgccgcaaccgcctgctcgaa
cggcttgccgaccgctgggcgaccgacccgcctgtggggttcaccgtcgccgccggcatc
accaccaccgcgcccgccatcgccaccttgctcaagcggatcgcgaccttgcccgacggc
atggtcgtcctgcccggccttgcccgcgcgacgtccgtcccggacgaggaatgggacgcg
ctcggccccgatgacagcggccgcggcgaggaaacccacccccaattccatctcaaactg
ctgctcgaccggatcggcgttgcgcgcgacgaagtccgcttgtggcctcgcgtcggctcc
gccgcctcgaccccgctgcgcgctcgagcggtcgccaatgccttcgtctccgcgcaattt
tccgacaagtggatcggcctgaagcccgccgagcggcgcctgtccggaatccgcaccgcc
gtcctgcccgatacggcggccgaggcgcaggcgatcgccctggccattcgcgaaacgctg
gaaacgccgggcaagacggccgcgctggtcacccctgaccggatgcttgcgcggcgggtc
tccgccttgctcgcgcgctggtcgatccacgccgacgacagcgccggcacgcccttgtcc
gaacggccgcccggaacgctgttgctgtcgcttgccgcggccatggcggaggaactggcg
ccggtgtcgctgctggcgctgctcaagcatccgctggtcggcggcgaagaagatgcgcgc
cgcacttggctcgacgacgtccggctgctcgacgtcgccctgcgcggcccgcgcccggcg
gcagggcttcacggcctcgaccggcatttcgccgagcgcgaggcggaagaccgcaattgc
cgcggctgcgtcgacgcgtggcaccgcgtgcgctcgcgtctcgaaccgctcgacgggcag
ggcgcccccaccacgctcgccgccttcgtcgcccgcctggtgaccgccgccggggttctc
gccggcgatcgcggctggcgcggacaggacgggcggatgctcgccgaactgcttgcggag
ctggaagcgtcggcggaggcgcagcggctgccggtcggcccggaagacgcggtcgccgtg
ctggccgaactgctggccgggcgcagcgtccggccgccctatggcgaccatccgcgggtc
ttcatctggggcctgctcgaagcgcggctgcaacaggccgacctgatgatcctcgccggc
ctcaacgaaggcgtctggccggccgtgcccgcgcccgatccgtggttggccccgcgtatc
cgcggcaagctcggcctgcccggcctcgactttcggatcggcctgtcggcgcatgatttc
gccagcgcgctcggcgcgcgcgaagtgttgatcacccggtccaagcgcgacgggcgttcg
ccaacggtcgcctcgcgcttcctcctccggctcgaagcgatcagcggcggcctgccgcgc
gattaccgcctcgaacggctgaccgccgcgctcgacgacccgggcgagccggtgccggtc
cgccgcccgcagccgcggccgccggccgccgaccggcccaagcgcatttctgtcacggcc
gtcgaccggctcaaggccgacccgttcgctttctacgcgcaggccatgcttcgcctgcgc
gcactcgatccggtcgatgccgaccataccgcgcggtggaagggcagcgcggtgcacaag
gtgttcgaagactggctgaaacaggacgaatgcgatcccgaccgcctgcgcccgcgcgcg
gaggccctgcttgccgacgagacaatccacccgatgcttcgcgcgctgtgggcgccgcgc
ctgctcgaagcgatcgactggatggcggacctggaacggtcgaaccgcgcgtcgggccgt
gcgccgctggtcgccgaagcgaagggggaggcggcgattgccggcatcacggtccatggc
atcgccgaccgcatcgaccggcttgcggggaccagcctcgcgatcatcgactacaagacc
ggcaggccgccggcgaagaaagcgatcgacgcgggcttcgcgttacagcttggcctgctc
ggcctgatcgcgcgcgccggcgggttcgacggcgtcacgggcgatccccaagcgttcgaa
tattggtcgctcgtccgcgaccgcgaccagttcggcaaatgcgtccacgccgacaaggat
atggggccggaggaatttcttgcccatgcgttcgccaatttcgccgaggccgcggaaaaa
tggctgaacgggacggagccgttcaccgccaagctcaacccggcgttcgcgccctacggc
gactatgaccagctgatgcggctggaagaatggtacggccgcaatgactag
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