Sphingomonas sabuli: H8M03_03880
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Entry
H8M03_03880 CDS
T07540
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ssau
Sphingomonas sabuli
Brite
KEGG Orthology (KO) [BR:
ssau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssau03032
]
H8M03_03880
03400 DNA repair and recombination proteins [BR:
ssau03400
]
H8M03_03880
Enzymes [BR:
ssau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
H8M03_03880
DNA replication proteins [BR:
ssau03032
]
Prokaryotic type
DNA Topoisomerases
H8M03_03880
DNA repair and recombination proteins [BR:
ssau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H8M03_03880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QNM83484
UniProt:
A0A7G9L4D5
LinkDB
All DBs
Position
766238..767260
Genome browser
AA seq
340 aa
AA seq
DB search
MPEQSQRLRHCSDSEPGFTRKKQGRYWAYFDQDGKRITDRETIERLNSVALPPAYTDAWY
CPHANGHLQATGIDARGRKQYRYHPNYRARADKKKFQGLTEFGNALPKIRSRVEHDLSQR
GLSREKVLAAVVRLLDTQYLRVGNERYAKENNSFGATTLLCRHVNAGNGKVKMRFRGKHG
KTKELTITDRRLGRIVRKCKDLPGQSLFQYVNGDGEAHPVSSADVNDYLHDIAGDDFTAK
HFRTWWASVIAMGEMLDAEDEKKISVNTMLEPVAEALGNTVAISRKSYVHPALIEAVKDN
PRDPLGGQERPRDRKWLSSTEVAFLKFLEHTYKPRARRAA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacagagtcaaaggttgcgccattgcagcgatagcgagccgggcttcacgcga
aagaagcaaggccgatactgggcgtatttcgatcaggacggcaagcggatcaccgaccgc
gaaaccatcgagcggctcaactcggtcgccctgccccccgcctacaccgatgcctggtat
tgcccgcacgcgaacggccatttgcaggccacgggcatcgatgcccggggtcgcaagcaa
tatcgttaccatcccaactaccgcgcccgcgccgacaagaagaaattccaagggctcacc
gaattcggcaatgcgctgcccaagatccgcagccgggtcgaacatgacctgagccagcgc
gggctgagccgcgaaaaggttttggctgctgtcgtccggctgctcgatacccagtatctg
cgcgtcggcaacgaacgctacgctaaggaaaacaacagctttggcgcgaccaccttgctt
tgccgtcacgtcaatgcaggcaacggcaaggtcaagatgcgctttcgcggcaagcacggg
aaaacgaaggaactgacgattaccgatcgccgcctcggtcgcatcgtacgcaagtgcaag
gacctgcccggccagtcgctgttccaatacgtcaacggcgacggcgaagcgcacccggtc
agctccgccgacgtcaacgactatctgcacgacatcgctggcgacgactttaccgccaag
catttccgcacgtggtgggcgagcgtgatcgcgatgggcgaaatgctcgacgccgaggat
gagaagaaaatcagcgtcaacacaatgctggaaccggtcgccgaagcgctcggcaacact
gtcgccatcagccgcaaatcctacgtccacccggcgttgatcgaagcggtcaaggacaat
cctcgcgatccgcttggcggccaggaacggccgcgcgaccgcaaatggctgtcgtcgacc
gaagtcgccttcctcaagttcctcgagcacacctacaaaccgcgagccaggcgcgcggct
tga
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