Sphingomonas sabuli: H8M03_04340
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Entry
H8M03_04340 CDS
T07540
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
ssau
Sphingomonas sabuli
Brite
KEGG Orthology (KO) [BR:
ssau00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssau01002
]
H8M03_04340
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ssau01011
]
H8M03_04340
Peptidases and inhibitors [BR:
ssau01002
]
Cysteine peptidases
Family C82
H8M03_04340
Peptidoglycan biosynthesis and degradation proteins [BR:
ssau01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
H8M03_04340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QNM83563
UniProt:
A0A7G9L4L4
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Position
865040..866293
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AA seq
417 aa
AA seq
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MSSPVLAQDQPLEPIELPPSIEQGVDLIYIDPEIKPEIDRRNELLRTMGFKDWSGAPIDL
YVPVNDRYTDLRRGLMKYRQRWGDLPQVQVPTGTVALKPGSKDARVTLLRQRLGLAAGDS
FDAALEKQVRDYQAAHGLKADGVAGNGTLASLNRGSEHFERMIILNMERARRLPTAQDNA
RYILVDAGAARLYVYEDGKVVDSMNVIVGDAERQTPMMAAELRYVQLQPYWNVPPDLAKN
LVAPRVVEQGVAYLEERDYAVFDGWEDDAAKIDPASVDWKGVAAGTVDVRLRRGPGEWNS
MGDMKFMIPNDFGIYLHDVPEPEKPMFQAENRWISNGCIRLQDADRLLKWAFGGKPNSTG
ETDERVDVPDPVPVYITYFTAAPTADGVAFRADPYNRDEKLLSRVTLDSVDIASTSE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtcgcctgtgcttgcgcaggaccagccgctcgagccgatcgagcttccgcccagc
atcgagcagggcgtcgacctcatctacatcgacccggagatcaagccggagatcgaccgc
cgcaacgagctgttgcggacgatgggcttcaaggactggagcggcgcgccgatcgatttg
tacgtgccggtcaacgaccgctacaccgaccttcgccgcgggctgatgaaatatcgccag
cgctggggcgacctgccgcaggtgcaggtgccgaccggcacggtggcgctgaagccggga
tcgaaggatgcgcgcgtcacccttctgcgccagcgcctcggccttgccgcaggcgacagc
ttcgacgccgcgctcgaaaagcaggtgcgcgattaccaggccgcgcacggtttgaaggcg
gacggcgtcgccggcaacggcacgctcgcctcgctcaatcgcggcagcgaacatttcgag
cggatgatcatcctcaacatggaacgcgcccgccgcctgccgaccgcgcaggacaatgcg
cgctacattctcgtcgatgccggcgccgcacgactttacgtctacgaggacggcaaggtc
gtcgattcgatgaacgtcatcgtcggcgatgccgaacggcagacgccgatgatggccgcc
gaactgcgctacgtgcagctgcagccttattggaacgtcccgcccgacttggccaagaat
ctggtcgcgccgcgggtggtggaacagggcgtcgcctatctggaggaacgcgattacgcg
gtgttcgacggatgggaagacgatgccgcgaagatcgacccggcgtcggtcgactggaag
ggcgtcgccgccggaacggtcgatgtccggctgcgccgcggtcccggcgaatggaattcg
atgggcgacatgaaattcatgattcccaacgacttcggcatctatcttcacgacgtgccg
gaaccggaaaaaccgatgttccaggccgaaaaccggtggatcagcaacggctgcatccgc
ctgcaggacgccgaccgcctgctcaaatgggcgttcggcggcaagcccaactcgaccggt
gagaccgacgagcgcgtcgacgttcccgatcccgtgccggtctacatcacctactttacc
gccgctccgaccgccgacggcgtcgccttccgcgccgatccgtacaaccgcgacgagaaa
ttgctttcgcgagtgaccctcgactccgtcgacattgcatccacttccgagtga
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