Sphingomonas sabuli: H8M03_04780
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Entry
H8M03_04780 CDS
T07540
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ssau
Sphingomonas sabuli
Brite
KEGG Orthology (KO) [BR:
ssau00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
H8M03_04780 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssau03019
]
H8M03_04780 (rnc)
03009 Ribosome biogenesis [BR:
ssau03009
]
H8M03_04780 (rnc)
03036 Chromosome and associated proteins [BR:
ssau03036
]
H8M03_04780 (rnc)
Enzymes [BR:
ssau01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
H8M03_04780 (rnc)
Messenger RNA biogenesis [BR:
ssau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
H8M03_04780 (rnc)
Ribosome biogenesis [BR:
ssau03009
]
Eukaryotic type
90S particles
RNase
H8M03_04780 (rnc)
Prokaryotic type
rRNA processing factors
H8M03_04780 (rnc)
Chromosome and associated proteins [BR:
ssau03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
H8M03_04780 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
DSRM_2
TetR_C_14
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
QNM83643
UniProt:
A0A7G9L4U4
LinkDB
All DBs
Position
953627..954292
Genome browser
AA seq
221 aa
AA seq
DB search
MSRSVADFVAERFGHQPRDVALFEAAVTHSSTRDVDYERLEFLGDRVLGLSIARWLYERF
PNEPEGKLSQRFNTLVDRATCGEIGRGIGLPDVIRVGKQAREDGASSSDNVVGDVVEAVM
GAIFLEAGLETAEQIIRRLWQPLVDEQRSAPKHPKSALQEFAAARSLPNPHYEVVDRSGA
QHLPQFTIRVSLPGHGDAEAQGTSKQEAETEAAKALLEKLR
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgagccggagcgtcgccgactttgttgccgaacggttcgggcaccagccgcgcgacgtg
gcgctattcgaagcggccgtgacccattccagcacgcgagatgtcgattacgagcggctt
gaattcctcggcgaccgcgtgctcggcctgagcatcgcccgctggctgtacgagcggttt
ccaaacgagccggaaggcaagctgtcgcagcgtttcaacacgctggtcgaccgtgccacc
tgcggcgagatcggccgcggcatcgggctgcccgacgtgatccgagtcggcaagcaagcg
cgcgaggacggggcgagcagcagcgacaatgtcgtcggcgatgtggtcgaagccgtgatg
ggcgccatctttctcgaggctgggctggaaacagccgagcagatcatccgccgcctgtgg
cagccgttggtcgacgagcagcgaagcgcccccaagcatcccaagtccgccttgcaggag
tttgccgccgcgcgcagcctgcccaatccccattacgaggtggtcgatcgcagcggggcc
cagcatctgccgcaattcactattcgcgtgtcgctgcctgggcatggcgacgcggaagcg
cagggcacgagcaagcaggaggccgagaccgaggcggccaaggcgttgctggagaagctg
cgatga
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integrated database retrieval system
