Sphingomonas sabuli: H8M03_05665
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Entry
H8M03_05665 CDS
T07540
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
ssau
Sphingomonas sabuli
Pathway
ssau00521
Streptomycin biosynthesis
ssau00523
Polyketide sugar unit biosynthesis
ssau00525
Acarbose and validamycin biosynthesis
ssau00541
Biosynthesis of various nucleotide sugars
ssau01100
Metabolic pathways
ssau01110
Biosynthesis of secondary metabolites
ssau01250
Biosynthesis of nucleotide sugars
Module
ssau_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
ssau00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
H8M03_05665 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
H8M03_05665 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
H8M03_05665 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
H8M03_05665 (rfbB)
00525 Acarbose and validamycin biosynthesis
H8M03_05665 (rfbB)
Enzymes [BR:
ssau01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
H8M03_05665 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
QNM83808
UniProt:
A0A7G9L5A9
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Position
1118879..1119937
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AA seq
352 aa
AA seq
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MRVLVTGGAGFIGSALVRHLVLDKGYEVLNVDALTYAGYLPSLRDVEGKANYRFLEANIC
DRDAMERAFAEFRPQRVMHLAAESHVDRSITGAADFVQTNVIGTFTLLEVARAFWAALDD
EDKAAFRFLHVSTDEVYGSLGDDGLFTEETPYDPSSPYSASKASSDHLAKAWHRTYGFPV
VVSNCSNNYGPYHFPEKLIPLTILNALAGEKLPVYGKGENVRDWLYVEDHARALDLIAEK
GRTGETYNVGGRNERKNIDVVRRICEVLDRLAPSNRPREELIEFVTDRPGHDARYAIDAS
KLEDELGWRARENFDTGIEKTVQWYLDNEWWWQPLRERYAGQRLGLLKSANG
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttctcgttaccggcggcgccggcttcatcggctcggcgctggttcgccacctc
gtgctcgacaagggctatgaggtgctcaacgtcgatgcgctgacctacgccggttacctg
ccgtcgctgcgcgatgtcgaaggcaaggccaattaccgcttcttggaagccaacatctgc
gaccgcgacgcgatggaacgggcgtttgccgagttccggccgcagcgggtgatgcacctg
gccgccgaaagccatgtcgaccggtcgatcaccggcgctgcggatttcgtccagaccaac
gtcatcggcacctttaccctgctggaagtggcgcgagctttctgggccgcgctcgacgac
gaggacaaggcggcgttccgctttcttcatgtgtccaccgacgaggtttacggatcgctt
ggcgacgacgggctgttcaccgaggaaacgccctacgacccgagctcgccttattccgcg
tccaaggcttcgtccgaccacctcgccaaggcgtggcaccggacgtacggctttccggtc
gtcgtctccaattgctccaacaattacgggccgtaccacttccccgagaagctcattcca
ctgacaatcctgaatgcgctcgcgggcgaaaaattgccggtttacggcaagggcgagaac
gtccgcgactggctctacgtcgaggatcacgcccgcgcgctcgacctgatcgccgagaag
ggacggaccggcgaaacctacaatgtcggcgggcgcaacgagcgtaagaacatcgatgtc
gtgcgccgcatctgcgaggtgctcgaccggctggctccgtccaaccgcccgcgcgaggag
ttgatcgagttcgtcaccgaccggccgggccacgatgcccgctacgcgatcgacgcgtcg
aagctggaggacgagctcggctggcgcgcgcgggagaatttcgacaccggcatcgaaaag
acggtgcaatggtatctcgataacgaatggtggtggcagccgctgcgcgaacgctacgcc
ggccagcggctcggcctactgaagtccgccaacggctaa
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