Sphingomonas sabuli: H8M03_08475
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Entry
H8M03_08475 CDS
T07540
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ssau
Sphingomonas sabuli
Pathway
ssau03030
DNA replication
ssau03410
Base excision repair
ssau03420
Nucleotide excision repair
ssau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H8M03_08475 (polA)
03410 Base excision repair
H8M03_08475 (polA)
03420 Nucleotide excision repair
H8M03_08475 (polA)
03440 Homologous recombination
H8M03_08475 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssau03032
]
H8M03_08475 (polA)
03400 DNA repair and recombination proteins [BR:
ssau03400
]
H8M03_08475 (polA)
Enzymes [BR:
ssau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H8M03_08475 (polA)
DNA replication proteins [BR:
ssau03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
H8M03_08475 (polA)
DNA repair and recombination proteins [BR:
ssau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
H8M03_08475 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H8M03_08475 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
HHH
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
QNM82068
UniProt:
A0A7G9L0B9
LinkDB
All DBs
Position
1703454..1706270
Genome browser
AA seq
938 aa
AA seq
DB search
MADGNHLYLVDGSSYIFRAYHRLPPLTNRHGQPAGAVYGYTAMLWKLADSLHKADGPTHM
AVILDASEHTFRNEMYDQYKAQRPPPPEDLVPQFPLIRTATRAFSIPCIEEKGLEADDII
ACYVTAAKAAGWKVTIVSSDKDLMQLIDDGAEGGPAVDMLDTMNDRRMDRAYVEAKFGVG
PELVGDVLALMGDSVDNVPGVPGIGPKTASKLIIEHGSLEAVLASAESIKQPKLRQNLID
HADNARLSRKLVELVCDANLPEPLEDLALKGIPPEPLKAFLEDQGFKTMLSRLTGGAPAA
GRSSSGGGLDLAAASIATKPAAPPEPKAITVDRSKYETVTDEVALDRWIDDARTLGLVAV
DTETDCIDCVIARLAGISLAVAPNRACYIPVGHSGADLLSEAPDQLPMALVLEKLKPLFE
DPAVLKIGHNFKYDWVMFDKAGIDVAPVDDTMIMSFDLEAGLHGHGMDELAKLHFDHECI
PFKQLCGTGKSQITFDKVPLEDATEYAAEDADITLRLWQRLKPRIASETVTRVYERVDRP
LVATIGRMERRGIKVDRDYLAGLSKDFSEEIARLEERIYMAACGPFTIGSPQQLGEVLYG
RLGLKGGRKGKSGQYSTDVNELERLAGEGVECARLVLDWRQLTKLKNTYTDALQAQINPE
TRRVHTSFSLSGAQTGRLSSNEPNLQNIPIRTEVGRKIRDAFVAEPGNVLMSADYSQIEL
RLAAHMADVPQLKQAFRDGADIHSMTAEELFGSSDRDNRNKAKTVNFAILYGISSWGLAG
RLGIGRDEGKAIIDRYFERFPGIRLYIEQTLQFARENGFTRTLFGRKTHFPNIRASNPSF
RAGAERAAVNAPIQGTSADLIKRAMARMDGALAAADLDGVKMLLQVHDELVFEVPEGREE
EAAKVVRDVMGSAAEPSLKLDVPLDVEVGWGEHWGAAH
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atggctgacggcaatcacctctacctcgtcgacggatcgagctacatcttccgcgcctat
catcggctgccgccgctgacgaaccggcatggccagccggcgggcgcggtctatggctat
accgcgatgctgtggaagctggccgacagtctgcacaaggcggacggcccgacccacatg
gcggtcatcctcgacgcgtcggagcacacgttccgcaatgaaatgtacgaccagtataag
gcccagcggccgccgccgcccgaagacctggtcccgcaattcccgctgatccggacggcc
acacgcgccttttccattccgtgcatcgaggaaaaggggctggaggccgacgacatcatc
gcctgctacgtcaccgcagccaaggcggccggctggaaggtgacgatcgtcagttcggac
aaggatctgatgcagctgatcgacgacggcgcggagggcgggcccgcggtggacatgctc
gacaccatgaacgaccgccgcatggaccgcgcctatgtcgaggccaagttcggcgtcggg
ccggaactggtcggcgacgtactggcgctgatgggcgacagcgtcgacaacgtgccgggc
gtgccggggattgggccgaagacggcgagcaagctgatcatcgagcacggcagcctggaa
gcggtgctggcctccgcggagagcatcaagcagcccaagctgcgccagaatttgatcgac
cacgccgacaatgcgcggctgtcgcgcaagctggtcgagctggtctgcgacgccaacctg
cccgagccgctggaagatctggcgctgaagggtattccgcccgaaccgctcaaggcgttc
ctggaagaccaagggttcaagaccatgctgtcgcgcctgaccggcggggcgccggcggcg
gggcgcagcagcagcggtggcggactcgacctggccgccgcgtcgatcgccaccaagccg
gcggcaccgcccgagccgaaagcgatcacggtcgaccggtcgaaatacgagaccgtcacc
gacgaagtcgcgctcgaccgctggatcgacgacgcgcgcacactggggctggtcgcggtc
gacaccgaaaccgactgcatcgattgcgtgatcgcccggctggcgggaatcagcctggcc
gtcgcgcccaaccgcgcctgttacattcccgtcggccattccggcgccgacctcttgtcg
gaagcgccggaccagttgccgatggcgctggtgctggaaaagctgaagccgctgttcgag
gatccggcggtcctgaagatcgggcacaatttcaaatatgactgggtgatgttcgacaag
gcggggatcgacgtcgccccggtcgacgacacgatgatcatgagcttcgacctggaagcc
ggcctgcacgggcatggcatggacgagctggccaagcttcacttcgaccacgaatgcatc
ccgttcaagcagctgtgcggcacgggcaagagccagatcacgttcgacaaggtgccgttg
gaggacgccaccgaatatgccgccgaggacgcggacatcacgttgcgcctgtggcagcgg
ctgaagccgcgcattgcgagcgagaccgtcacccgcgtctacgagcgcgtcgaccggccg
ttggtcgcgaccatcggccgcatggaacggcgcgggatcaaggtcgaccgcgattacctg
gccgggctgagcaaggatttctccgaggagatcgcccgcctggaggagcggatctacatg
gctgcctgcggcccgttcaccatcggctctccgcagcagttgggcgaagtgctctacggg
cggctgggcctgaagggcggacgcaagggcaagagcgggcaatattcgaccgacgtcaac
gagctggagcggcttgccggcgaaggcgtggagtgcgcccggctggtgctcgactggcgc
cagctgaccaagttgaagaacacttacaccgacgccttgcaggcgcagatcaatccggaa
acgcggcgggtccacaccagcttctcgctgtccggcgcgcagaccgggcggctgtcgtcc
aacgagcccaacctgcagaacatccccatccgcaccgaggtcgggcgcaagatccgcgac
gccttcgtcgccgagccgggcaacgtgctgatgagcgcggattacagccagatcgaattg
cggctggccgcgcacatggccgacgtgccccagttgaaacaggcctttcgcgacggcgcg
gacatccacagtatgaccgcggaggaattgttcggatcgtccgaccgcgacaatcgcaac
aaggcgaagacggtcaatttcgcgatcctgtacggcatttcatcgtgggggctcgcgggc
cggctgggcatcggccgcgacgagggcaaggcgatcatcgaccgctatttcgaacggttc
cccggcattcgcctgtacatcgagcagacgttgcagttcgcacgcgagaacggcttcacc
cgcaccctgttcggccgcaagacccatttccccaacattcgcgcgtccaacccgtcgttt
cgcgccggggccgagcgcgccgcggtcaacgcgccgatccagggcaccagcgccgacctg
atcaagcgggcgatggcacgcatggacggggcgctggccgccgccgacctcgacggcgtc
aagatgctgctgcaggtccatgacgaactggtgttcgaagtgcccgagggccgcgaagaa
gaagccgccaaggtcgtgcgcgacgtgatgggcagcgccgccgaaccgtcgctgaagctc
gacgtgccactggacgtggaggtgggctggggcgagcattggggcgccgcgcattga
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