KEGG   Sphingomonas sabuli: H8M03_09025
Entry
H8M03_09025       CDS       T07540                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
ssau  Sphingomonas sabuli
Pathway
ssau02020  Two-component system
ssau02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:ssau00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    H8M03_09025 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    H8M03_09025 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ssau03021]
    H8M03_09025 (rpoN)
Transcription machinery [BR:ssau03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     H8M03_09025 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR MLTR_LBD HTH_31 AAA_28 HTH_21 HTH_12
Other DBs
NCBI-ProteinID: QNM82165
UniProt: A0A7G9L0L6
LinkDB
Position
complement(1812044..1813492)
AA seq 482 aa
MGLGPSIQIRQSQQLVLTPQLAQAIKLLALSNVELEAAIAEEVSKNPLLDVGSSDDGEDP
GEAGETPSDAPSLTDELIPGAGEDDRPLDYDFNGEALQNDSFADVTVASGSGEEFDFDRI
EATAASLAEYLEGQLHGASGPRAALAEIIVGQLDVNGYLSTPIADIARDTGATAAEVEDA
LRLVQDLDPSGVGARSLSECLALQAQAADRYDPAMARLIDNLELLARGRMNDLKRICGVD
DEDLADMVAELRAYDPKPGSRFSSEAVEQVTADVFVRRTREGFLVELNGAALPRLLVNRR
YYQELRQGPQDKASKAWLSECLASANWLVKALDQRARTIVKVVSEIVKTQQGFFERGAEA
LKPLTLRQVAEAIDMHESTVSRVTTNKYLLCDRGLVELKYFFRSGVASSDGEGDGASAEA
VKSAIREIIDREAEVLSDDAIAALLKQRGFDCARRTVVKYRELLGIGSSVQRRRQRKIAG
LG
NT seq 1449 nt   +upstreamnt  +downstreamnt
gtgggcctcggtccaagcatccagatccgccaatcgcagcagctggtgctcacgccgcag
ctggcgcaggcgatcaagctgctggcgctgagcaacgtcgagctggaagcggcgattgcc
gaggaagtgtcgaaaaatccgctgctggacgtgggcagcagcgacgatggcgaggatccc
ggcgaggccggcgaaaccccgagcgacgcgccgtcgctgaccgacgaattgatccccggc
gcgggcgaggacgaccggccgctcgattacgacttcaacggcgaggcgttgcagaacgac
agtttcgccgatgtcaccgtggcgtcgggcagcggcgaggagttcgacttcgaccgcatc
gaggcgaccgccgcatcgctggccgaatatctggaagggcagttgcacggcgcgtccggg
ccgcgggcggcactggcggagatcatcgtcggccagctggacgtcaacggatatctgtcg
acgccgattgccgacatcgcccgcgataccggcgcgacggcggccgaagtggaagacgcg
ttgcggctggtgcaggatctggatccgtcgggcgtgggtgcgcgcagcctgtccgaatgc
ctggccctgcaggcgcaagcggcggaccgttacgacccggcgatggcgcgcctgatcgac
aatctggagttgctcgcacgcgggcggatgaacgacctcaagcggatttgcggggtcgat
gacgaggatctggccgacatggtcgcggagctgcgcgcctacgatcccaagccgggcagc
cgcttttcgtccgaggccgtcgaacaggtcaccgcggacgtgttcgtgcgccgcactcgc
gaggggtttctcgtcgagctgaacggcgccgcgctgccgcggctgctggtcaaccgccgc
tattaccaggagcttcgccaggggccgcaggacaaggccagcaaggcgtggctgagcgaa
tgcctcgccagcgccaactggctggtcaaggcgctcgaccagcgcgcccggacgatcgtc
aaggtagtgtcggagatcgtcaagacccagcagggcttcttcgagcgcggcgcggaggcg
ttaaagccgctgaccctgcgccaggtcgccgaggcgatcgacatgcacgagtcgaccgtc
agccgggtgacgacaaacaagtatctgctgtgcgatcgcgggctggtggagctgaaatat
ttcttccgttccggtgtcgcgtccagcgacggcgagggcgacggggcgtcggcggaagcg
gtcaagtcggcgatccgcgagatcatcgaccgcgaggccgaggtgctgagcgacgacgcc
atcgcggcgctgctcaagcagcgcggtttcgactgtgcccgccggacggtggtcaaatat
cgcgaattgctgggcatcgggtcgtcggtccagcgccgccgccagcgcaagatcgccggg
ctgggctaa

DBGET integrated database retrieval system