Sphingomonas sabuli: H8M03_10870
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Entry
H8M03_10870 CDS
T07540
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ssau
Sphingomonas sabuli
Pathway
ssau03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ssau00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
H8M03_10870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssau03021
]
H8M03_10870
03400 DNA repair and recombination proteins [BR:
ssau03400
]
H8M03_10870
Enzymes [BR:
ssau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
H8M03_10870
Transcription machinery [BR:
ssau03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
H8M03_10870
DNA repair and recombination proteins [BR:
ssau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
H8M03_10870
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
IDH
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
QNM82496
UniProt:
A0A7G9L1J7
LinkDB
All DBs
Position
2170026..2171096
Genome browser
AA seq
356 aa
AA seq
DB search
MAVNAKNWQELKKPNGLEKKQAGGDSRRRATFIAEPLERGFGMTLGNSLRRVLLSSLQGA
AVTSIKIEGALHEFSSLPGVREDVTDIVLNVKQIALKMEGEGPKRLQLSATGPAEVTAGM
IATSGDMEVTNPDLVICHLDDGATLNMELTADIGKGYQPAAANRPADAPIGIIPVDALYS
PVRQVAYKVENTRVGQELDYDKLTLTIETDGTVTPEDAIAYAARILQDQLQLFVHFDDSQ
VRSAQPAMIGQPAMAAEASPADTNQLNRYLLKKVDELELSVRSANCLKNDNIIYIGDLVQ
KTEAEMLRTPNFGRKSLNEIKEVLASMGLRLGMDIPGWPPENIEEMAKKLEQELLG
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcaacgcgaagaactggcaggaactgaagaagcccaacgggcttgagaagaag
caggccggtggcgacagccgccgccgcgcgaccttcatcgccgaaccgctggagcgcggc
ttcggcatgacgctcggcaactcgctgcggcgggtgctgctgtcgtcgctgcagggcgcg
gccgtcacctcgatcaagatcgaaggtgcgctgcacgaattcagctcgcttccgggcgtt
cgcgaggacgtcaccgacatcgtgctcaacgtgaagcagatcgcgctcaagatggaaggc
gaaggccccaagcggctgcagctttcggcgaccggcccggccgaagtcaccgccggcatg
atcgccacctcgggcgacatggaggtcaccaaccccgacctcgtcatctgccacctcgac
gatggcgcgacgctcaacatggagctgaccgcggacatcggcaaaggctatcagcctgcc
gccgccaaccgcccggccgacgccccgatcgggatcatcccggtcgacgcgctatattcg
ccggtgcgccaggtcgcctacaaggtcgagaatacccgcgtcgggcaggagctggactat
gacaagctcacgctgaccatcgagaccgacggcaccgtcaccccggaagacgcgatcgct
tatgcggcccgcatcctccaggaccagctgcagctgttcgtccacttcgacgacagccag
gtccgttcggcccagccggcgatgatcgggcagccggcgatggccgcggaagcgtcgccc
gccgacaccaaccagctcaaccgctacctgctcaagaaggtcgacgagctggagctgtcg
gtgcgcagcgccaactgcctcaagaacgacaacatcatctacatcggcgacctcgttcag
aagaccgaagccgagatgctgcgcacgccgaacttcggccgcaagtcgctcaacgagatc
aaggaagtgctcgcctcgatgggcctgcgcctcggcatggacatccccggatggccgccg
gaaaacatcgaggaaatggccaagaagcttgagcaggaactgctcggctaa
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