Streptococcus suis BM407 (serotype 2): SSUBM407_0116
Help
Entry
SSUBM407_0116 CDS
T00935
Symbol
pbp1B
Name
(GenBank) putative penicillin-binding protein 1B
KO
K03693
penicillin-binding protein 1B
Organism
ssb
Streptococcus suis BM407 (serotype 2)
Pathway
ssb00550
Peptidoglycan biosynthesis
ssb01100
Metabolic pathways
ssb01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ssb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SSUBM407_0116 (pbp1B)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SSUBM407_0116 (pbp1B)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ssb01003
]
SSUBM407_0116 (pbp1B)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ssb01011
]
SSUBM407_0116 (pbp1B)
Glycosyltransferases [BR:
ssb01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
SSUBM407_0116 (pbp1B)
Peptidoglycan biosynthesis and degradation proteins [BR:
ssb01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
SSUBM407_0116 (pbp1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
CAZ54948
UniProt:
A0A0H3MSZ8
LinkDB
All DBs
Position
107853..110276
Genome browser
AA seq
807 aa
AA seq
DB search
MATKSDKQDFKKKISALGLGDVVGVFLRTLKLLFNSVAVLVFLFGLFGAGIGIGFVVSLF
DDVKIPKTEELVAKVSEVSRISTVTYSDGSLVSEVNSDLLRVPITSEEVSNYLKQAVIAT
EDETFETHNGVVPKAVLRAALGSVGLGSSSGGSTLTQQLIKQQLVGDAPTFTRKANEIVS
ALALERNMTKEEILTIYLNVSPFGRNNQGRNIAGVEAAAQGIFGKPAKDLTVPQAAFIAG
LPQSPIVYSPYASDGTRKSDEDMVYGIERYQDVLFNMYRASFLTKEEYETYKAYDIKQDF
IAPAPVMADTKDYLYYKVMEEAQEVMFDYLVKRDKVSKNDLKNDETKASYEELAKQELSQ
GGYTIKSTVDQKIYAAMQSVVANYGSVLDDGNEYVETGSVLIDNATGAILGFVGGRDYAT
NQNNHAFDTLRSPASTIKPLLAYGIAIDQGLIGSASILSDYPTNFSSGQPIMYGSGRGTG
MMNLQTAIDRSVNIPAFWTYKMMRNAGVDAKAYMDKMNYHIPMYDIESVPLGGGVEISVL
TNTNAYQTLANGGVYNKHYIVESITASDGTVVYQHEATPVQVYSKATASIMNQLLRQVVN
SGYTTTFKSRLSGLNPQAASSDFVGKTGTSNEVNDVWLMLSTPRVTLGTWAGNDDNSEMY
VWTGYHNNSQYVAHMVDALYNVNADMFAGKFELDSSVIASSVVASTGQRAGTTQVNGRQV
TVGGAMTTSYWAKNGAPVTSYNFMVGGTDSDRAQAWNTIIGSQTATSSSSTQRSSSTRSS
TSSSANNTNQSSETQTATSEQANNDSP
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atggcgactaaatcagataagcaagattttaaaaagaaaatcagtgccctaggcttaggg
gatgtagtaggagttttccttcggacgctgaaattattattcaattcagtagctgtcttg
gtgttcctattcggtctttttggtgcgggtataggaattggtttcgtggttagtcttttt
gatgacgttaagattcccaaaacagaggaactggtagcgaaggtttcagaagttagtcgg
atttccaccgttacctattcggatggtagcttggtgtcggaagttaattcagatctgctt
cgtgtacctattacttcggaagaggtctctaattatctaaaacaggctgtaattgcgaca
gaggatgaaacatttgaaacccacaatggggttgtgcctaaggctgttttgcgtgcggca
ctgggatcagttggtctaggttcatctagcggtggttcaaccttgacgcagcaattgata
aaacagcaacttgtcggagatgctccaacctttacgcgtaaggctaatgagattgtttcg
gctttggcattagagcggaatatgaccaaggaagagattttaaccatttacttaaatgtt
tctccatttggtcgaaataatcagggacgaaatattgcaggggtagaagctgcggctcag
ggaatttttggtaaaccagcgaaagacttgactgttcctcaggctgcttttattgcaggc
ttaccgcaaagtccgattgtttattctccctatgcatcagatggaacacgtaaatcagat
gaagatatggtttacggtattgaacgctatcaagatgttctctttaatatgtatcgggcg
tcattcttgaccaaggaagaatacgaaacctataaagcctacgatattaaacaagatttt
attgctccagctcctgtaatggcggatacgaaagattatctctattacaaggtcatggaa
gaagcgcaagaggttatgtttgattacctggtgaaacgtgacaaggtttctaaaaatgac
ttgaaaaatgatgaaacaaaggcatcctatgaggagttggccaagcaagaattgagccaa
ggtggctacacgattaagagtaccgttgatcaaaaaatctatgcggcgatgcagtctgtt
gtggcaaactatggatctgttttggatgatggaaacgaatatgtcgagacaggtagtgtg
ttaattgataatgccacaggggccattttaggatttgtgggtggtcgcgactatgcaacc
aaccaaaataaccatgcctttgatacccttcgttcgccagcgtcaaccatcaagcctctg
ttagcttacggtattgcgattgatcaaggtttgataggttctgccagcatcctttcagat
tatccaacgaacttttcaagtggacaaccgattatgtatggttcaggacgtggtactggt
atgatgaacttacagacggctattgaccgttctgttaacattcctgctttttggacctat
aagatgatgagaaatgcaggtgtagatgccaaagcgtacatggataaaatgaattatcat
attcctatgtacgatattgaaagtgtaccgttgggtggtggtgttgaaatttcagtattg
acaaataccaatgcctatcaaactttggcaaatggtggcgtttataacaaacattacatt
gttgaaagcattactgcctctgatggaacagtagtgtatcagcatgaagcgactccggtt
caagtctattctaaagcaactgcaagtattatgaaccagcttttgagacaggttgtcaac
tctggttatactacgacgttcaagagtcgattgagtggtttaaacccacaggcagcatca
tctgatttcgtcggtaagacgggaacaagtaatgaagtcaatgacgtgtggctcatgcta
tcaacccctagagtaactttaggtacctgggctgggaatgatgataactcagaaatgtat
gtctggacaggctaccacaataattcacaatatgtggcccatatggttgatgcgctttac
aatgttaatgcggatatgttcgcaggaaaatttgaattagacagtagtgttattgcttct
agcgtcgttgcttctacaggtcaacgtgcagggacaacacaggtaaatgggcgccaagta
acagttggcggtgcgatgacaactagttattgggctaaaaatggtgcaccggtaacgagc
tataacttcatggttggggggacagatagtgatcgagcacaggcttggaatacaattatc
ggctcccaaacggcaacatcaagtagctcaacccaacgaagcagttcgactcggagtagc
acgagttcttcagctaataacacgaaccagtcatcagaaacgcaaacagcaactagtgag
caagcgaataatgattcaccttga
DBGET
integrated database retrieval system
