Streptococcus suis BM407 (serotype 2): SSUBM407_1321
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Entry
SSUBM407_1321 CDS
T00935
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ssb
Streptococcus suis BM407 (serotype 2)
Pathway
ssb03030
DNA replication
ssb03430
Mismatch repair
ssb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SSUBM407_1321 (dnaE)
03430 Mismatch repair
SSUBM407_1321 (dnaE)
03440 Homologous recombination
SSUBM407_1321 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssb03032
]
SSUBM407_1321 (dnaE)
03400 DNA repair and recombination proteins [BR:
ssb03400
]
SSUBM407_1321 (dnaE)
Enzymes [BR:
ssb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SSUBM407_1321 (dnaE)
DNA replication proteins [BR:
ssb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SSUBM407_1321 (dnaE)
DNA repair and recombination proteins [BR:
ssb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SSUBM407_1321 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
CAZ56178
UniProt:
A0A0H3N522
LinkDB
All DBs
Position
complement(1411128..1414238)
Genome browser
AA seq
1036 aa
AA seq
DB search
MLAQLDTKTVYTFMDSMVTIESYVGRAKELGYHALGIMDKNSLYAAYSFMESCNKMGLQP
IIGCELDWKLQGEEQDITTQLIALTTRGYRNLLKISTAKMTGQDDFETIRQYLVDIAVVV
PYFSGIEHLELGVNYYIGVTVDTPVQDFKQAPLPIHTVRFFEEEQLESLQVLHAIRDNIP
LNQVSDVDSRQKLLSADSLTNLFSNRFPQAVDNLRDLVAGISYQLNTDLKLPRFNRDRPA
VEELYERSYQGLEEKGLTNSLYKERLEKELSIIHQMEFDDYFLIVWDLLRFGRSQGYYMG
MGRGSAVGSLVAYALNITGIDPVKHNLLFERFLNAERYSMPDIDIDIPDIHRADFIRYVR
DRYGSTHAAQIVTYSTFGAKQAIRDVFKRFGTPEYELSNITKKISFRDSLTSAYQRNAAF
RQIINSKIEYQKAFAIAQQIEGQPRQTSIHAAGIVMSDEELTDTIPLKIGDDMLVTQYDA
HAVEANGLLKMDFLGLRNLTFVQKMAEGVRERYQQEIDIAKIDLEDKKTLELFAAGRTKG
IFQFEQPGAISLLRRVKPGRFEDIVATTSLNRPGASDYSDNFVKRKHGQETVDLLDPTIA
PILQPTYGIMLYQEQVMQIAQVYAGFTLGKADLLRRAMSKKNAQEMQAMEAEFLQGALKN
GHAEENAREIFGMMAKFAGYGFNRSHAYAYSALAFQMAYFKSHYTDVFFDVMLNHSSSAY
IEDAMQFDFEVARLTINNIPYHDKFDKSKVYLGLKTLKGLPKDLALWILDHRPYKSVEDF
ILRLPDNFKKKDLLIPLIQIGLFDDFDANRKKIIENLDNLFVFAEAIGTFFAEESYSWTD
VEDYSDSEKFMLEQELLGVGISPHPLVNICRESKRSFTDLADLAVGNRATVLVQIQAIRL
IRTKKTGEQMAFLRVTDTKRTLDVTLFPESYRQYASILEEGGMGYITGRVQERDGQLQLV
LEKLEPVSLEKFWILLENREHDYAVARILDKYRGSIPVVLHYQDSNQTIQAEHHMVMKTP
QLEEELSEFVMKTIFR
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgctggcacaattagatacaaagacagtttatacctttatggatagcatggtgacgata
gagagttatgtaggcagggctaaagagcttggttaccacgcattggggataatggataaa
aacagtctttatgcagcctatagttttatggaatcctgtaacaaaatggggcttcaacca
attattggttgtgaactggactggaaattacagggagaggagcaggacatcactactcaa
ttgattgctctgacaaccagaggttatcgcaatctattgaaaatttcgactgctaagatg
acagggcaagatgattttgaaactattcgtcaatatttagtcgacatagcagtggttgtt
ccttatttttctggcattgagcaccttgagttgggtgtaaactattatatcggagtgaca
gttgacacaccggttcaagattttaagcaagcaccccttccaatccatactgttcgtttt
tttgaagaggaacaattggaaagtctacaggttctccatgctattcgagataatattccg
cttaatcaggtttcagatgtagatagtcggcaaaagcttttatcggctgatagcttaacc
aatctattttctaatcggtttccgcaagcagttgataatttacgtgacttggttgcaggg
atttcttatcaattaaatacagatttaaaattgccgcgttttaatcgtgacagacctgca
gtggaagaattatacgagcgctcctatcaaggattagaagagaagggcttgactaattca
ctgtataaggaacgcttggaaaaggaattatccattattcatcaaatggaatttgatgat
tatttcttgattgtatgggacctacttcgttttggacgtagccaagggtactacatggga
atggggcgcggttcagctgttggaagcctagttgcctacgccttaaatatcacaggtatt
gatcctgttaagcataatcttctctttgaacgctttctcaatgctgaacgttattcaatg
cccgatattgatattgatattccagatattcatcgagcagattttattcgttatgtacga
gatcgttatggttcaacccatgctgctcaaattgtaacctactcgacatttggagctaag
caggctattcgtgatgtatttaagcgtttcggaacacctgaatatgagttaagtaatatt
accaagaaaatttcatttagagatagtcttacttctgcctatcagcgaaatgccgctttt
cgccagattatcaatagtaagatagagtaccaaaaagcttttgcgattgctcaacaaatt
gaagggcaaccccgacagacttctatccatgcagcagggatagtgatgagtgatgaggag
ttgacagataccatccctcttaaaataggggatgacatgctggtaacccaatatgatgca
catgctgttgaggcgaatggtctgttgaaaatggatttccttggcttacgaaatctgacc
tttgtgcaaaaaatggcagaaggagtacgtgaacgttatcagcaggaaattgatattgcc
aagatagatttagaagacaagaaaaccttggaactttttgctgctggtcggactaaggga
atttttcaatttgaacagcctggtgcgattagcctgcttcgaagggtcaaacctggtcga
tttgaagatatagttgcaacaacgagtttgaatagaccgggggctagtgattattcggat
aactttgtaaaacgcaaacatggacaagagacagttgatttgttggatccaaccattgct
cctattttacaaccgacttatggtatcatgctttatcaggaacaggtcatgcagattgca
caggtctatgcaggctttacgcttggcaaggcggatttactccgcagggcgatgtctaaa
aagaatgcgcaggaaatgcaggcaatggaagcggaatttttacagggagcactgaaaaac
ggacatgctgaagagaatgcaagggaaatatttggcatgatggctaagttcgctggttat
ggttttaaccgtagccacgcctatgcttattcagccttagcctttcaaatggcctatttc
aagagtcactatacggatgtcttttttgatgtcatgctcaatcattctagcagtgcttat
attgaagatgcgatgcagtttgactttgaggtagctcgactcacgattaacaatattcct
tatcacgataagtttgataaaagtaaggtttacctaggattaaaaacactgaaaggtttg
cctaaagatttagctttatggatattggatcatcgtccctataagtctgtagaagatttt
attttgcgcttgccagataatttcaagaaaaaggatttactaatccctcttattcagatt
ggtttatttgatgattttgacgccaatcgaaaaaagattattgaaaatctagacaatctc
tttgtctttgcagaggcaattggtacattttttgcagaggagagttatagttggacagat
gtagaagattacagcgacagtgaaaaatttatgctagagcaagaattgctaggtgttggt
attagtccgcatcctttagtcaatatttgtcgagagtctaagcgtagttttacagatttg
gctgatttagcggttggcaatcgagcgaccgttcttgtgcagattcaagctattcgattg
attcgtaccaaaaagactggggagcagatggcatttcttcgagtgacagataccaagagg
acgcttgacgtgactcttttccccgaatcttatcgccaatacgcttctattttggaagaa
gggggaatggggtacatcacaggtagagtgcaagagcgggatggacagttgcaattagtt
ctagaaaaattagagcctgtcagtttagagaaattttggattcttttggaaaatcgagaa
cacgattatgctgttgctcgtattttggataaatatagaggaagcattccagtagtactt
cattatcaagatagtaatcagacaattcaggctgagcaccacatggttatgaaaacgcct
caattagaagaagagttaagtgaatttgttatgaaaacgatttttcgataa
DBGET
integrated database retrieval system
