Streptococcus suis BM407 (serotype 2): SSUBM407_1792
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Entry
SSUBM407_1792 CDS
T00935
Symbol
pnpA
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ssb
Streptococcus suis BM407 (serotype 2)
Pathway
ssb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SSUBM407_1792 (pnpA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssb03019
]
SSUBM407_1792 (pnpA)
03016 Transfer RNA biogenesis [BR:
ssb03016
]
SSUBM407_1792 (pnpA)
Enzymes [BR:
ssb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SSUBM407_1792 (pnpA)
Messenger RNA biogenesis [BR:
ssb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SSUBM407_1792 (pnpA)
Transfer RNA biogenesis [BR:
ssb03016
]
Prokaryotic type
tRNA degradation factors
SSUBM407_1792 (pnpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_2
PCB_OB
KH-I_KHDC4-BBP
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
CAZ56648
UniProt:
A0A0H3MXB8
LinkDB
All DBs
Position
complement(1878416..1880635)
Genome browser
AA seq
739 aa
AA seq
DB search
MSKQVFETVFAGKKLVVETGQVAKQANGAVVVRYGDSTVLTAAVMSKKMATGDFFPLQVN
YEEKMYAAGKFPGGWMKREGRPSTDATLTARLIDRPIRPMFAEGFRNEVQVINTVLSYDP
DASAPMAAMFGSSLALAISDIPFNGPIAGVQVGYVNGELIINPDQAQQEASLLELTVAGN
KDAINMVESGAKELSEEVMLEALLKGHAAIQELLDFQNQIVAAVGKEKADVELLQVDPEL
QAEIVAAYNDDLKKAVQVEEKLAREDATNAVRETVIATYEEKYAEHEEFDRIMRDVHEIL
ELMEHTEVRRLITEDKVRPDGRRVDEIRPLDAEVDFLPNVHGSGLFTRGQTQALSVLTLA
PMGETQIIDGLDDEYKKRFLHHYNFPQYSVGSTGRYGAPGRREIGHGALGERALEQVLPS
LEDFPYAIRLVAEVLESNGSSSQASITAGTLALMAGGVPIKAPVAGIAMGLISDGTNYTV
LTDIQGLEDHFGDMDFKVAGTRDGITALQMDIKIDGITPQILEEALAQAKKARFEILDVI
EATIPEVRPDLAPTAPKIDTIKIDVDKIKIVIGKGGETIDKIIAETGVKIDIDEDGLVAI
FSPDRAAIERTKEIIAGLVREAKVDEVFQAKVVRLEKFGAFVNLFDKTDALVHVSEMAWT
RVNKPEDLVEVGDVVDVKVIKIDDKGRIDASMKALLPKPEGYVEPEKRERSEKPRRHKEH
KEKKDNNFGEFKFHKVDKK
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacaagtatttgaaacggtttttgctggcaaaaaattggtcgttgaaacaggt
caagttgccaaacaagccaacggtgcggttgtcgttcgctacggtgattccacagttctt
acagcggcagttatgtcaaaaaaaatggcgacgggagacttcttccccctccaagtcaac
tatgaagagaaaatgtacgctgctgggaaattcccaggtggctggatgaagcgtgaaggt
cgtccgtcaactgatgcgaccttgacagctcgtttgattgatcgtccgattcgtccaatg
tttgcggaaggtttccgtaacgaagttcaagtcatcaacacagtgctttcttatgatcca
gatgcatctgctccaatggcagccatgtttggttcctcattggcattagcgatctcagac
attccattcaatggtccaattgctggtgttcaggttggttatgttaatggcgaattgatt
attaacccagatcaagctcaacaagaagcctcccttttagaattgacagttgctggtaac
aaagacgctatcaacatggttgaatcgggtgccaaagaattatcagaagaagtgatgttg
gaagcactcttgaaaggtcatgcggccattcaagaactcttggatttccaaaatcaaatc
gtggcagcagttggtaaggaaaaagcagatgtggagcttcttcaagtggacccagaattg
caggctgagattgttgcagcttacaatgacgatttgaaaaaagcggtgcaggttgaagaa
aaattggcccgtgaagatgcgaccaatgccgttcgcgagactgtcattgcaacttacgaa
gaaaaatacgctgagcacgaagaatttgaccgtatcatgcgtgatgtccatgaaatcttg
gaactcatggagcatacagaagttcgtcgtttgattactgaagacaaggtccgtccagat
ggtcgccgtgttgatgagattcgtcctttggatgcagaagtagacttcttgccaaatgtt
cacggctcaggtctctttacccgtggtcaaacgcaagccctctctgtcttgaccttggca
ccaatgggagaaacccaaatcatcgacggtttggatgatgagtacaagaaacgcttcttg
catcactacaatttcccgcaatactcagttggctcaactggtcgttacggtgcaccaggt
cgtcgtgagattggtcacggtgctctcggtgagcgcgctcttgagcaagtcttgcctagc
ttggaagacttcccttacgctatccgcttggtagcagaagtcttggagtcaaacggttct
tcttcacaggcatctatcacagctgggacccttgcccttatggcaggtggtgtgccaatc
aaggcacccgttgcagggattgctatgggtctgatctcagatggtaccaattacaccgtc
ttgaccgatattcaaggtcttgaggatcacttcggcgacatggacttcaaggtagctggt
actcgtgacggtatcacagcccttcaaatggatattaaaattgacggtatcacaccacaa
atcttggaagaagccttggcacaagctaagaaggcacgttttgaaatccttgatgtcatc
gaagcgactatcccagaagttcgtcctgacttggcaccaactgcaccgaagattgacact
atcaagattgatgtggacaagatcaagattgtcataggtaagggtggtgaaaccattgat
aagattattgcagaaactggcgtgaaaattgatatcgacgaagacggtcttgtggcgatc
ttctcaccagaccgtgctgcaattgagcgcacaaaagaaatcatcgctggtcttgtccgt
gaagcaaaagtggacgaagtcttccaagcaaaagtggttcgtttggagaaattcggtgcc
tttgtcaacctttttgacaagaccgatgccctcgtccacgtttctgaaatggcttggaca
cgtgtcaataaaccagaagatttggttgaggttggcgatgttgtagatgttaaggtgata
aaaattgatgataagggacgtattgatgcttctatgaaagctcttctaccaaaaccagaa
ggctacgtggaaccagaaaaacgtgaacgttcagaaaaacctcgtcgtcataaagaacac
aaagagaaaaaagataataactttggtgaatttaaatttcataaagtagataaaaaataa
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