Sus scrofa (pig): 100049698
Help
Entry
100049698 CDS
T01009
Symbol
SNCAIP
Name
(RefSeq) synphilin-1 isoform 1
KO
K04558
synphilin-1
Organism
ssc
Sus scrofa (pig)
Pathway
ssc05012
Parkinson disease
ssc05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05012 Parkinson disease
100049698 (SNCAIP)
05022 Pathways of neurodegeneration - multiple diseases
100049698 (SNCAIP)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNCAIP_SNCA_bd
Ank_2
Ank_4
Ank
Ank_5
Ank_3
Motif
Other DBs
NCBI-GeneID:
100049698
NCBI-ProteinID:
NP_001098523
Ensembl:
ENSSSCG00000014235
UniProt:
A7WSU6
LinkDB
All DBs
Position
2:125889165..>125956864
Genome browser
AA seq
919 aa
AA seq
DB search
MEAPEYLDLDEIDFSDDISYSVTSLKTIPELCRRCDSQNEDRPVSSSSWNCGVSTLITNA
QKPTGIADVYSKFRPVKRVSPLKHQPETLENNESDDQKNQKAEYQKGGDSDPAPQPEELS
PRDGEGSPQSKSTEPSALLGELEHYDLDMDEILDVPYIKSSQQLASFTKVTSEKRILGLC
TTINGLSGKACSAGSAENSLSNVTPFCVLSPVKSPYLRKAPSVVRDQQKLSTEESETSPP
LVKCSSAYESENQSKDFLNKTFSDPQGHKVDKATPDCQLRAFHLQSSAAEPKLGEQVSGV
NWTGSPRPQKKRSEYLKKVKSILNIVKEGQISLLPHLAADNLDKIHDENGNNLLHVAASQ
GHAECLQHLTSLMGEDCLNERNADKLTPAGLAIKNGQLECVRWMVSETEAIAELSCSKDF
PSLIHYAGCFGQEKILLWLLQFMQEQGISLDEVDQDGNSAVHVASQHGYLGCIQTLVEYG
ANVTMQNHAGEKPSQSAERHGHTLCSRYLVVVETCMSLASQVVKLTKQLKEQTMQRVTLQ
NQFQHLLEAQKSEARSLLSSPSSPSSPASRKSQWKSPDTDEESLAKSKPGVQEGIQVLGS
LSVSSRARAKAKDEDSDKILRQLLGKDISENVCTQEKLSLEFQDAQASSRNSKKIPLEKR
ELKLARLKQLMQRSMSELDTDSNNSEDPKGTPVRKADRPRPQPIVESVESVDSAESLHLM
IKKHTLASGRRFPFGIKASKSLDGHSPSPTSESSEPDLESQCPGSGTTPPNQPPAEPPQP
SPDSTAAQKVATSPKSALKSPSSKRRTSQNLKLRVTFEEPVVQMEQSGLEQNGEKDRDKG
RPLPRTSAGNESGDQLKRPFGTFRSIMETLSGNQNNNNNYQASNQLKTSTLPLTSLGRKT
TDSKGNPGSSASKGKNKAA
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atggaagcccctgaataccttgatttggatgaaattgacttcagcgatgacatctcttat
tcagtcacatcactcaagaccatcccggaactgtgccgaagatgtgattcgcaaaatgaa
gacagaccagtttctagctccagctggaattgtggtgtctcaactcttattacgaacgcg
caaaagcccacaggaatcgctgatgtgtacagtaagttccgtccagtgaagcgagtgtcc
ccactgaaacatcagccagagactttggagaacaatgaaagtgatgaccagaagaaccag
aaggcagagtaccagaaagggggtgattcggacccagccccccaacccgaggagctcagc
cccagagatggagagggtagtcctcaaagtaagagcacggaacccagcgccttgctgggt
gaactggagcactacgacctcgacatggatgagattctggatgtgccttacattaaatcc
agtcaacaacttgcctcttttaccaaggtgacttcggagaaaagaattttaggtttatgc
acaaccatcaatggcctttctggcaaagcctgctctgcaggtagtgctgagaactcgctg
tccaacgtgaccccgttttgtgttctttctcccgtgaaaagcccttacttgagaaaagca
ccctctgtcgtccgtgaccagcaaaagctctccactgaggaatccgagacttcgcctcct
ctggttaaatgtagctctgcatatgagtctgaaaaccagagtaaagacttcctaaacaag
acctttagtgatcctcaaggtcacaaagttgacaaggcaacgccagactgccagctcagg
gccttccatctgcaatcctcagccgcagaacccaaactaggtgagcaggtcagtggcgtg
aactggaccggctccccaaggccccagaagaaaaggagtgagtacctgaagaaagtgaaa
agcattctgaacatcgttaaagaagggcagatatctctgctgccgcacctggctgctgac
aatctagacaaaatccatgacgaaaacggaaacaatctcttacacgttgccgcgtcacag
ggacacgccgaatgtctgcagcacctcacttctttgatgggagaagattgcctcaatgag
cgaaatgccgacaagttgactcccgcgggcctggccatcaagaatggtcagttagagtgt
gttcgctggatggtgagtgaaacagaagccattgctgaattgagttgttctaaggatttt
ccaagccttattcattatgcaggttgcttcggccaggagaagattctgctgtggcttctt
cagttcatgcaagaacagggcatctcgctggatgaagtggaccaggatgggaacagcgcc
gttcacgtggcctcgcagcatggctacctcgggtgcatacagaccctggttgaatatgga
gccaatgtcaccatgcagaaccatgcaggggaaaagccctcccagagcgccgagcgccac
ggacacaccctgtgctcccggtacctggtggtggtggagacctgcatgtcgctggcttcc
caggtggtgaagctcaccaaacagctgaaggagcagacaatgcaacgcgtcacactgcag
aaccagttccaacaccttctagaagcccagaaatcagaggccagatcactcctttcttca
cccagttcaccatcttccccagcttccagaaagtcccagtggaaatccccagataccgat
gaggagtctctagccaaaagcaaaccaggagtccaggaggggattcaggttcttggaagc
ctgtctgtatccagccgggctagggccaaagcaaaagatgaagattctgataaaatcctc
cgccagttattaggaaaagatatctcagaaaacgtctgcacgcaggaaaagctgtccttg
gaattccaggatgcccaggcgtcttcaagaaactcaaaaaagatccctctggagaagagg
gaactgaagttagccaggctgaagcagctgatgcagcggtcaatgagtgagttggacaca
gactccaacaactctgaggaccccaagggcacacccgtgagaaaggctgacaggcccaga
cctcagcccatcgtggaaagcgtggagagtgtggacagtgccgaaagcttacacttgatg
ataaagaaacacacattggcatcaggacgcaggtttccctttggtatcaaggcctccaaa
tctctggacggccatagcccatctcccacctcagagagcagcgagccagacctggaatcc
cagtgtccaggctcaggaactactcccccaaaccagccccctgcagaaccccctcagccc
agccccgacagcacagccgcccagaaagtggccacgagtcctaagagtgccctcaagtcc
ccatcctccaagcgccggacatctcagaacttgaaactcagagttacctttgaggagccc
gtggtgcagatggagcaaagtggccttgaacagaacggcgaaaaggacagagataagggc
aggcccctcccacggacctctgcggggaacgaatcaggggatcaactgaaaaggcctttt
ggaaccttccgatccatcatggagacgttgagtggcaaccaaaacaataataataactat
caggcatccaaccagctaaagacgtccacgctgcccttaacttcacttggacggaagacc
acagacagtaaaggaaaccccgggagctctgctagcaaaggaaagaataaggcagcataa
DBGET
integrated database retrieval system