Sus scrofa (pig): 100101926
Help
Entry
100101926 CDS
T01009
Symbol
EIF4A3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03013
Nucleocytoplasmic transport
ssc03015
mRNA surveillance pathway
ssc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100101926 (EIF4A3)
09122 Translation
03013 Nucleocytoplasmic transport
100101926 (EIF4A3)
03015 mRNA surveillance pathway
100101926 (EIF4A3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssc03019
]
100101926 (EIF4A3)
03041 Spliceosome [BR:
ssc03041
]
100101926 (EIF4A3)
03009 Ribosome biogenesis [BR:
ssc03009
]
100101926 (EIF4A3)
03012 Translation factors [BR:
ssc03012
]
100101926 (EIF4A3)
Enzymes [BR:
ssc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100101926 (EIF4A3)
Messenger RNA biogenesis [BR:
ssc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100101926 (EIF4A3)
mRNA cycle factors
Stress granule specific factors
100101926 (EIF4A3)
Spliceosome [BR:
ssc03041
]
Complex C
Other components
EJC/TREX
100101926 (EIF4A3)
Ribosome biogenesis [BR:
ssc03009
]
Eukaryotic type
90S particles
Helicases
100101926 (EIF4A3)
Translation factors [BR:
ssc03012
]
Eukaryotic type
Initiation factors
eIF-4
100101926 (EIF4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
100101926
NCBI-ProteinID:
NP_001093663
Ensembl:
ENSSSCG00000017155
UniProt:
A6M931
LinkDB
All DBs
Position
12:2285679..2311750
Genome browser
AA seq
411 aa
AA seq
DB search
MAATATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK
PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAV
QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA
IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL
VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA
NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL
YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcggccacggccacgatggcgacctcaggctcggcgcggaagcggctgctgaaagag
gaagacatgaccaaagtggaattcgagaccagcgaggaggtggacgtgactcccacgttc
gacactatgggcctgcgggaggacctgctgcgcggcatctatgcctacggttttgaaaag
ccttcggcaatccagcagcgagctattaagcagatcatcaaggggagagatgtcattgca
caatctcagtctggtacaggcaaaacagctaccttcagtatttctgtcctgcagtgtttg
gatattcaggttcgtgaaacccaagctttgatcttggctccaacgagagagttagctgta
cagatccagaagggcctcctcgctctgggtgactacatgaacgtccagtgccatgcctgt
attgggggcaccaacgtcggggaggacatcaggaaactggactatggacagcacgttgtc
gccggcacacctgggcgagtctttgacatgattcgtcgcagaagtttgaggacacgtgcc
atcaagatgttggttttggatgaggctgatgaaatgttaaataaagggttcaaagagcag
atctacgacgtgtacaggtacttacccccggccacgcaggtggtgctcatcagcgccacg
ctgccccacgagatcttagagatgaccaacaagttcatgaccgaccccatccgcatcttg
gtgaaacgtgatgaactgactctggaaggcatcaagcagttctttgtggccgtggagaga
gaggagtggaagtttgacaccctgtgtgacctctatgacacactcaccatcactcaggcy
gtcatcttctgtaacaccaagaggaaggttgactggctgacggagaagatgagggaagcc
aacttcaccgtgtcatccatgcacggggacatgccccagaaggagcgcgagtccatcatg
aaggagttccgctcgggtgccagccgcgtgctcatttccacggacgtctgggcccggggg
ctggacgtgccccaggtgtccctcatcatcaactacgacctgcccaacaacagagagctg
tacatacacagaatcgggcgatcgggccgctacggccgaaagggcgtggccataaacttt
gtaaagaacgacgacatccghatcctcagagacattgagcagtactactccactcagatt
gacgagatgcccatgaacgttgctgatctgatctga
DBGET
integrated database retrieval system
