Sus scrofa (pig): 100125545
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Entry
100125545 CDS
T01009
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03022
Basal transcription factors
ssc05016
Huntington disease
ssc05017
Spinocerebellar ataxia
ssc05165
Human papillomavirus infection
ssc05166
Human T-cell leukemia virus 1 infection
ssc05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100125545
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100125545
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
100125545
05165 Human papillomavirus infection
100125545
09164 Neurodegenerative disease
05016 Huntington disease
100125545
05017 Spinocerebellar ataxia
100125545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
100125545
03021 Transcription machinery [BR:
ssc03021
]
100125545
Transcription factors [BR:
ssc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
100125545
Transcription machinery [BR:
ssc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100125545
RNA polymerase III system
TFIIIB
100125545
RNA polymerase I system
SL1/TIF-1B
100125545
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
Motif
Other DBs
NCBI-GeneID:
100125545
NCBI-ProteinID:
XP_020941156
LinkDB
All DBs
Position
1:18..3870
Genome browser
AA seq
82 aa
AA seq
DB search
MVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKV
RAEIYEAFENIYPILKGFRKTT
NT seq
249 nt
NT seq
+upstream
nt +downstream
nt
atggtggggagctgtgatgtgaagttccctataaggttagaaggccttgtgcttacccac
caacagttcagtagttatgagccagagttgtttcctggtttaatctacagaatgatcaaa
ccgagaattgttctccttatttttgtctctggaaaagttgtattaacaggtgctaaagtc
agagcagaaatttacgaagcgtttgagaacatctaccctatcctaaagggtttcaggaag
acgacgtaa
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