Sus scrofa (pig): 100126288
Help
Entry
100126288 CDS
T01009
Symbol
PEX6
Name
(RefSeq) peroxisome biogenesis factor 6
KO
K13339
peroxin-6
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
100126288 (PEX6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100126288 (PEX6)
Membrane trafficking [BR:
ssc04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
100126288 (PEX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_16
AAA_33
AAA_lid_3
AAA_5
AAA_22
AAA_11
RuvB_N
nSTAND3
NPHP3_N
AAA_25
TsaE
TIP49
RNA_helicase
AAA_28
Mg_chelatase
AAA_14
IstB_IS21
Vps4_C
DUF815
T2SSE
Parvo_NS1
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
100126288
NCBI-ProteinID:
NP_001103896
Ensembl:
ENSSSCG00000001653
UniProt:
A5GFQ7
A0A8D1W915
LinkDB
All DBs
Position
7:complement(38039852..38052384)
Genome browser
AA seq
969 aa
AA seq
DB search
MALAVLRVLEPFPTEAPPLAVLLPPEGPWPAAGLGLVLALRPAGESPAGPALLVAALEGP
GTGTEEQGPGPPQLLVSRALLQLLALGSGAWVRARPVRRPPALGWALLGTSSGTGLGPRV
GPLLVRRGEALPVPGPRVLETRPALQGLLGPGTRLAVTELRGRAKLGPETEDSSRPPPPP
LVSSFAASGTVRRLRGVLGGTGNSLGVSRSCLRSLGLFQGEWVWVTRVGESSITSQPHLA
TVQVLEPRWDLSERLGPVSGQLGEPLADGLALVPATLAFNLGCDPLEVGELKIQDLWELK
VFTISLALGQHKGIADWLSLLVNVLELESEIFLVLIRRAVQEGDVLCVPTVGQVEILEGS
PEKLPRWREMFFKVKKTVGEAPDGPACAYLAAASHTSVYLVGSTLSLVPGLPSGESTPWS
SLSPPGLETLVTELCAALKPRLQPGGALLTAPGSVLLRGPPGSGKTTAVTAACGRLGLHL
LKVPCSSLCADSSGAVETKLQAAFSRARRCRPVVLLLTAVDLLGRDRDGLGEDARVVATL
RRLLLDEDPLTSHPPLMVVATTSRAQDLPADVQTAFPHELEVPVLSEGQRLSILQALTAH
LPLGQEVNLAQLARRCAGFVVGDLYALLTHSSRAACTRIKNSGWAGGLSEEDEGELCAAG
FPLLAEDLGQALEQLQSAHSQAVGAPKIPSVSWHDVGGLQEVKKEILETIQLPLEHPELL
SLGLRRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFAR
ARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRP
DLLDPALLRPGRFDKLVFVGASEDRASQLRVLSAITRKFRLEPSVSLVAVLDHCPPQLTG
ADLYSLCADAMTAALKRRVRDLEDGLEPGSSALLLTMEDLLQAAARLQPSVSEHELLRYK
RIQRKFAAC
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atggcactggcagtcctgcgggtgctggagcccttcccgaccgaggcacccccgttggcg
gtgctgctgccacccgagggcccctggcctgcggcggggctgggtctggtgctggcgctg
cggcctgcaggggagagcccggcagggcccgcgctgctcgtggcggccctggaggggcca
ggcacaggcaccgaagagcaggggccgggccccccgcagctgctagttagccgcgctctg
ctgcagctcctggccctgggctccggggcctgggtgcgggcgcggccggtgcggcggccc
ccagcgctgggctgggcgctgcttggcacctcgtcagggactgggctcggaccgagagtc
gggccgttgctggtgaggcgcggagaggctctgccagtgccgggaccgcgggtgctggag
acgcggccggcgttgcaagggctgctgggcccaggaacgcggctagctgtgactgagctc
cgtgggcgggccaaactgggtccagagactgaggacagcagccggcccccaccgccaccc
ttggtgtcctccttcgcggcttctggcacggtccggcgactccggggagttctgggaggg
actgggaactcgctgggggtgagcaggagttgtctccgtagcctcggccttttccaaggc
gaatgggtatgggtgacccgggtcggagagtcatcgatcacttcccagccacacctggcc
acggtgcaggtcctagagcctcgatgggacctctctgaaagactgggacctgtttctggg
cagctgggagagcccctcgctgacggactggcccttgtgcctgccactctggcttttaat
ctcggctgtgatcccctggaagtgggagagctcaaaattcaggacttgtgggaattaaaa
gtctttaccatttcactggccctgggccagcataaaggcatcgcagattggttatctttg
ctggtgaacgttttggagctggagtcagaaatcttcctggtgctcattagaagggcagtc
caggaaggggatgttctgtgcgtgccaacagtcgggcaagtagagatcctggaaggaagc
ccagagaaactgcccaggtggcgggagatgttttttaaagtgaagaaaacagttggggaa
gctccagatgggccagcctgcgcctacttggctgctgccagccatacctccgtgtacttg
gtgggttctaccctgagcctcgttccagggctcccctcgggggaatccacgccctggagc
agcttgtctcctccaggcctggagaccttggtgaccgagctctgtgctgccctgaagccg
cgcctccagccagggggtgccctgctgacagcacctggcagtgtccttctacggggcccc
ccgggcagtgggaaaaccaccgcagtgactgccgcctgcggccgccttgggctccactta
ctgaaggtgccctgctccagcctctgtgcagacagtagcggggctgtggagacaaaactg
caggccgctttctcccgggcccggcgctgccggcctgtggttctgttgctgacagccgtg
gacctgctgggccgggaccgcgatgggctaggtgaggacgcccgtgtggtggccacactg
cgccgcctcctcctggacgaagaccccctcaccagccaccctcccctgatggttgtggcc
accacgagccgggcccaggacctgcctgctgatgtgcagactgcgtttcctcatgagctg
gaggtgcctgtgctgtcagaggggcagcggctcagcatcctgcaggccctcactgcccac
ctccccctgggccaagaggtgaacctggcacagctggcacgacggtgcgcgggctttgta
gtgggggatctctacgcccttttgacccacagcagccgggcagcctgcaccaggatcaag
aactcgggttgggcaggtggcttgagtgaagaggacgagggggagctgtgtgctgccggt
ttccctctcctggccgaggacttggggcaggcgctggagcagctgcagtcagcgcactct
caggccgtcggagcccccaagatcccctcggtgtcctggcacgatgtgggcgggctgcag
gaggtgaagaaggagatcctggagaccattcagctccctctagagcaccctgagctgctg
agcctgggcctgaggcgctcgggccttctgctccacgggccgcccggcactggcaagacc
ctcctggccaaggcagtagccaccgagtgcagcctcaccttcctcagcgtgaaggggccc
gagctcatcaacatgtacgtgggccaaagtgaggagaatgtacgcgaagtgttcgccagg
gccagggccgcggccccatgcattatcttctttgatgaactcgactccttggccccaagc
cgggggcgaagtggagactccggaggtgtgatggacagggtggtgtcccagctcctggcc
gagctggatgggcttcacagcactcaggatgtgtttgtgatcggagccaccaatagacca
gaccttctggaccctgcccttctgcggcctggcaggtttgacaagctggtgtttgtggga
gcgagcgaggaccgtgcctcccagctccgtgttctgagcgccatcacacgcaaattcagg
ctagagccctctgtgagcctggtggccgtgttggaccactgcccaccccagctgacaggt
gcagacctctactccctgtgcgctgatgccatgacagctgccctgaaacgcagggttcgg
gacctggaggatggcctggagccggggagctcagcactgctgctcaccatggaggacctg
ctgcaggccgcggcccggctgcagccctcagtcagcgagcacgagctgctccgctacaag
cgcatccagcgcaagtttgccgcctgctag
DBGET
integrated database retrieval system
