Sus scrofa (pig): 100127138
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Entry
100127138 CDS
T01009
Symbol
F11R
Name
(RefSeq) junctional adhesion molecule A precursor
KO
K06089
junctional adhesion molecule 1
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04514
Cell adhesion molecule (CAM) interaction
ssc04517
IgSF CAM signaling
ssc04530
Tight junction
ssc04670
Leukocyte transendothelial migration
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
100127138 (F11R)
04517 IgSF CAM signaling
100127138 (F11R)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
100127138 (F11R)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
100127138 (F11R)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssc04515
]
100127138 (F11R)
04090 CD molecules [BR:
ssc04090
]
100127138 (F11R)
Cell adhesion molecules [BR:
ssc04515
]
Immunoglobulin superfamily
CTX family
100127138 (F11R)
CD molecules [BR:
ssc04090
]
Proteins
100127138 (F11R)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
ig
I-set
Ig_2
V-set
C1-set
Ig_VEGFR-1-like_5th
VEGFR1-3_N_Ig-like
C2-set_2
V-set_CD47
Adeno_E3_CR1
Ig_C17orf99
Ig_MYOM1
Invasin_D3
DUF5626
NRG4_TM
Motif
Other DBs
NCBI-GeneID:
100127138
NCBI-ProteinID:
NP_001121916
Ensembl:
ENSSSCG00000006369
Vega:
OTTSUSG00000002336
UniProt:
A0ACM8QFY3
B2ZI35
LinkDB
All DBs
Position
4:89425101..89447889
Genome browser
AA seq
298 aa
AA seq
DB search
MGTKAKVGRKQLLLFTSVILCSLTLGRGAVYTSEPEVRVAENKPAKLSCSYSGFSSPRVE
WKFTHGDITSLVCYNNKITASYENRVTFSASGITFHSVTRKDTGTYTCMVSDEGGNTYGE
VTVNLIVLVPPSKPTISVPSSATIGNRAVLTCSEKDGSPPSEYFWFKDGVLMPTEPKSNR
AFINSSYSLNPKTGELIFDPVSASDAGDYTCEAQNGYGSPMRSDTVHMEAAELNVGGIVA
AVLVTLILLGVLIFGIWFAYSRGYFDRAKKGTSSKKVIYSQPTARSEGEFRQTSSFLV
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggggacaaaggcgaaagtcgggaggaaacaattacttctcttcacatcagtgatcttg
tgctccctgacgttgggcaggggtgcagtgtacacttctgaaccagaagtcagagttgct
gagaacaaacctgccaagctgtcctgctcctactccgggttctcctctccccgtgtggag
tggaaatttacccatggcgacatcaccagcctcgtctgctataacaacaagatcacagct
tcctatgagaaccgagttaccttctcggctagtggcatcaccttccattctgtgaccagg
aaagacacagggacgtatacttgtatggtctctgacgaaggcggcaacacctacggggaa
gtcactgttaacctcattgtgcttgtgcctccatcgaagcctacaatcagtgttccctcc
tctgctaccatcgggaaccgggctgtgctgacctgctcagagaaagatggttccccaccc
tctgaatacttctggttcaaggatggggtattgatgcctacagagcccaagagcaaccgt
gccttcatcaactcttcctatagcctgaatccgaagacaggggagctgatctttgatcct
gtgtcggcctctgatgctggagattacacttgtgaggcacagaatgggtatgggtcaccc
atgagatcagatactgtgcacatggaagctgcggaactgaatgtgggcggcatcgtggca
gctgtccttgtcacactcattctcctcggagtgttgatttttggcatctggttcgcctac
agccgcggctactttgacagagcaaagaaagggacttccagtaagaaggtgatttacagc
caacccactgctcgaagtgaaggggaattcagacagacctcatcattcttggtgtga
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