Sus scrofa (pig): 100135667 Help Entry 100135667         CDS       T01009                                  Symbol NLRC5 Name (RefSeq) protein NLRC5   KO K22615   NLR family CARD domain containing 5 Organism ssc  Sus scrofa (pig) Brite KEGG Orthology (KO) [BR:ssc00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04054 Pattern recognition receptors [BR:ssc04054]     100135667 (NLRC5) Pattern recognition receptors [BR:ssc04054]  Cytoplasmic pattern recognition receptors   NOD-like receptors    100135667 (NLRC5) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Atypical_Card NACHT LRR_6 LRR_4 NLRC4_HD2 LRR_8 AAA NPHP3_N AAA_16 AAA_22 nSTAND3 NOD2_WH AAA_33 AAA_25 RsgA_GTPase ABC_tran Motif Other DBs NCBI-GeneID:  100135667 NCBI-ProteinID:  NP_001265710 UniProt:  M4MEX3 LinkDB All DBs Position 6:18933179..19036288 Genome browser AA seq 1846 aa AA seqDB search MDPISRHLGTKNLWGWLVRLLCKHSEWLSAKVKFFLPNMDLGARNEASDPTQRVVLQLRK LRTQSQITWQAFIHCVCMELDVPLDLEVLLLSTWGHGEGLPSQLEADEEHPPESQPHSGL KRPHQSCGPSPRPKQCRKQQRELAKRYLQLLRTFAQQRYDSRSPGPGQPVACHRTYIPPI LQWNRASVPFDTQEGTVAGGPKAEDGTDVSIRDLFSAKANKGPRVTVLLGKAGMGKTTLA HRLCQEWADGQLERFQALFLFEFRQLNLITNFLMLPQLLFDLYLRPEAGPEAVFQYLEEN ANKILLIFDGLDEVLHPGSSKEAADPEASASALTLFSRLCHGTLLPGCWVMTTSRPGKLP ACLPTEVVTVSMWGFDGPRVEEYVSRFFSDQPVQEAALAELRASWHLWSMCVVPALCQVA CLCLHHLLPGRSPGQSAALLPTVTQSYVQMVLSLSPQGFLPAESLMGLGEVALWGLETGK VVFTAGDIPPPTMAFAAALGLLTSFCVYTEPGHQETGYVFTHLSLQQFLAALHLMASPKV DRDTLAQHVTLNSRWVLRTKARLGLLDHHLPTFLAGLASCACHPFLTPLAQQEEVWVRAR QAAVMQALEKLATRKLTGPKLIELCHCVAETQKPELASLVAQSLPHHLSFRNFLLTYADL AALTNILGHRDAPIHLDFEGCPLEPHCPEALAGCEQVENLSFKSRKCGDAFAEALSRSLP TMGSLKKLGLSGSRITARGISHLVRALPLCPQLEEVSFQDNQLKDGEVLNIVEILPHLPQ LRMLDLSRNSVSVSTLLSLTKVAVTYPTIRKLQVRETDLVFLLSPPTEMTTELQRDPDLQ ENASQRKEAQRRSLELRLQKCQLSVYDVKLLLAQLRMGPQLDEVDLSGNQLEDEGCQLVA EAAPQLHIARKLDLSDNGLSVAGMQRVLSAVRTCRTLAELHISLLHKTVVLMFAPEPEEQ EGIQKRLTHCGLQAQHLEQLCKALGGSCHLKYLDLSGNALGDEGVALLAQLLPGLGALQL LNLSENGLSLDAVFSLTQCFSTVRWLQRLDFSSESQHVILSGDSRGRHLLAGGSLPEFQA GAQFLGFRQRRIPRSFCLKECQLEPPSLSRLCETLEKCPGPLEVELFCKVLSDQSLETLL HHLPRLPQLSLLQLSQTGLSQRSPLLLADLFSLYPRVQKVDLRSLHHMTLHFRFSEEQEG GCCGRFTGCGLSQEHMEPLCWSLSKCEDLSQLDLSANLLGDDGLRSLLECLPQVPISGSL DLSHNGISQESALRLVETLPSCPRVREASVNPGSKQTFWIHFSRKEEARKTLRLSECSFR PEHVPRLATGLSQALQLTELTLNQGCLGLEQLTILLGLLKWPAGLLTLRVEEPWVGRAGV LTLLEVRAHASGNVTEISISETQEQLCMQLEFPHQENPEAVALRLAHCDLGTHHSLLVRE LMETCARLRQLSLSQVKLCKASSLLLQSLLLSLSELKNFRLTSSCVSSDGLAHLTFGLSH CHHLEELDLSNNQFGKEDTKVLMGALEGKCWLKRLDLSHLPLSSSTLAALIQGLSHMSLL QSLRLSRSGVDDIGCCHLSEALRAATSLVELGLSHNQIGDAGAQHLAAILPGLPELRKID LSANGIGPAGGVRLAESLTLCEHLEELMLDYNALGDLTALGLARGLPQHLRVLHLRSSHL GPEGALSLGQALDGCPYVEEINLAENSLAGGIPHFCQGLPMLRQIDLMSCEIDNQTAKPL AASFVLCPALEEIMLSWNLLGDEAAAELAQVLPRMGRLKRVDLEKNRITAHGAWLLAEGL AQGSGIQVIRLWNNPIPQDTAQHLQSREPRLDFAFFDHQPQVPWDA NT seq 5541 nt NT seq  +upstreamnt  +downstreamnt atggaccccattagtcgccacctgggcaccaagaacctgtggggatggctcgtgaggctg ctctgcaaacactcagaatggctgagtgccaaggtgaagttcttcctccccaacatggac ctgggtgccaggaacgaggcctcagaccccacacagagggtcgtcctacaactcagaaaa ctgcgtacccagagtcagatcacctggcaggcgttcatccactgtgtgtgcatggagctg gacgtgccgctggacctggaggtactgctgctgagcacctggggccacggagaagggctc cccagtcagctggaagctgatgaggagcacccacctgagtctcagccccactctggcctc aagcggccacatcagagctgtgggccctcccctcgcccaaagcagtgcaggaagcagcag cgagaactggccaagaggtacctgcagctgctgagaacgtttgcccagcagcgttacgac agcaggagccctgggccaggacagccggtcgcctgccaccgaacctacatcccgcccatc ttgcaatggaaccgagcctctgtgcccttcgacactcaggaggggactgttgcagggggc cccaaggcagaagatggcacggatgtgagcattcgggacctcttcagtgccaaagccaac aagggcccgagagtcacggtgcttctgggaaaggcgggcatgggcaagaccacgctggcc caccggctctgccaagagtgggccgatggtcagctggagcgcttccaggccctgttcctt ttcgaattccgccagctcaacctgatcacaaacttcctgatgctgccacagctccttttt gatctgtacctgaggcccgaggcgggcccagaggcagtcttccagtacctggaggagaat gctaataaaatcctgctcatctttgatgggctggacgaggtcctccaccccggctccagc aaggaggctgcagatcctgaggcctcggcgtcagccctcaccctcttctcccgcctctgc catgggaccctcctgcccggctgctgggtcatgaccacctcccgtccagggaagctgccc gcctgcctgcccacagaggtggtcacggtcagcatgtggggctttgacggaccacgggtg gaggagtacgtgagccgcttcttcagcgaccagccagtccaggaggcggccctcgcggag ctgcgggccagctggcatctctggagcatgtgtgtggtgcccgcgctgtgccaggtcgcc tgcctctgcctccaccatctgctcccaggccgctctccaggccagtctgcagccctcctg cccaccgtgacccagagctacgtgcagatggtgctttccctcagcccccaagggttcctg cctgccgagtccctgatgggcctcggggaggtggccctgtggggcctggagacggggaag gttgtcttcactgcaggagacatccctccacccacgatggccttcgcggcggccctcggc ctgctcacctccttctgtgtgtacacggaacccgggcaccaggagacaggctacgtcttc acccacctcagcctgcagcagtttttggctgccctgcacctgatggccagccccaaggtg gacagagacacacttgcccaacatgtcaccctcaattctcgctgggtgctgcggaccaaa gctaggctgggcctcttagaccaccaccttcccacctttctggccggcctggcctcctgc gcctgccaccccttcctcacacccctggcacagcaggaggaggtgtgggtgcgtgccagg caggcggcagtcatgcaagccttggagaagttggccactcgcaagctgacggggccaaag ctgatagagctatgtcactgcgtggctgagacacagaagccggagctggccagcctcgtg gcccagagcctcccccatcacctctccttccgcaactttctgctgacctatgccgacctg gctgccctgaccaacatcctcgggcacagggatgcccccatccacctggattttgagggc tgccccttggagccacactgtcctgaagccctggcaggctgcgagcaggtggagaatctc agctttaagagcaggaagtgtggggatgcctttgctgaagccctctccaggagtttgcca acaatggggagcctgaagaagctggggttgtcaggaagtaggatcactgcccgaggcatc agccacctggtgcgggctttgcccctctgtccacagctggaagaggtcagctttcaggac aaccagctcaaggacggggaggtcctgaacatcgtggaaatacttccccacctgccgcag ctccggatgcttgacctgagccgcaacagtgtctccgtgtcaactctcctctccttgaca aaggtggcagtcacgtaccctaccattaggaagctgcaggtcagggagacagacctcgtc ttccttctctccccacctacagagatgaccacagagctacaaagagacccagacctacag gaaaatgccagccagaggaaagaggctcagaggagaagcctggagctcaggctccagaag tgtcagctcagtgtctatgatgtgaagctgctcctcgcccagctccggatgggtccacag ctggatgaagtggacctctcagggaaccagctggaagatgaaggctgtcaactggtggca gaggctgcgccccagctgcacattgccaggaagctggacctcagcgacaatgggctttct gtggctgggatgcaacgtgtgctgagtgcagtgagaacctgccggaccctggcagagcta cacatcagtctgctgcacaaaaccgtggtgctcatgtttgccccagaaccagaggagcag gaggggatccagaagaggctgacacattgtggcctgcaagcccagcaccttgagcagctc tgcaaagcgctgggaggaagttgccacctcaagtacctcgatttatcaggcaatgctctg ggggacgaaggtgtggccctgctggctcagctgctccccgggcttggtgccctgcagctg ctgaacctcagtgagaacggtttgtccctggatgctgtgttcagtttgacccagtgcttc tctacagtgcggtggcttcagcgcttggacttcagctctgagagccagcacgtcatcctg agcggtgacagcagaggcaggcatctcttggctggcggatctttgccagagtttcaagct ggagcccagttcttggggttccgtcagcgccgcatccccaggagcttctgcctcaaggag tgtcagctggagcccccgagcctctcccgcctctgtgagactctggagaagtgcccgggg cctctggaagtcgaattgttctgcaaggtcctgagtgaccagagcctggagaccctgctg catcaccttccccggctcccccaactaagcctgctgcagctgagccagacgggactgtcc caaaggagccccctcctgctggccgacctcttcagcctgtacccacgggttcagaaggtg gatctcaggtccctccatcacatgactctgcacttcaggtttagcgaggagcaggaaggc ggatgctgtggcaggttcacaggctgtggcctcagccaggagcacatggagccgctgtgt tggtcgctgagcaagtgtgaggacctcagccaactggacctctccgccaacctgctgggt gatgacgggctcaggtccctcctggaatgtctccctcaggtgcccatctccggttcgctt gatctgagtcacaacggcatctctcaggaaagtgccctccgcctggtggaaacccttccc tcctgcccacgtgtccgggaggcctcggtgaacccgggctccaagcagaccttctggatt cacttctcccgaaaggaggaggctaggaagacactaaggctgagtgagtgcagcttcagg ccagagcacgtgcccagactggccaccggcctgagccaggccctgcagctgacagagctc acgttgaaccagggctgcctgggcctggagcagctgactatcctcctgggcctgctgaag tggccggcggggctgctgactctcagggtagaggagccgtgggtgggcagagccggagtg ctcaccctgctggaagtccgtgcccacgcctcaggcaacgtcactgaaataagcatctct gagacccaggagcagctctgtatgcagctggaatttccccatcaggagaacccagaagcc gtggccctcaggttggctcattgtgatctcgggacccaccacagcctccttgtcagggag ctaatggagacatgcgccaggctgcggcagctcagcttgtcccaggtgaagctctgcaag gccagctctctgctgctgcaaagcctcctgctgtccctctctgagctgaagaacttccgg ctgacctccagctgtgtgagctctgatgggctagcccacctgacatttggtctgagccat tgtcaccacctggaggagctggacttgtctaacaatcaatttggcaaggaggacaccaag gtgctgatgggagcccttgagggcaaatgctggctgaagaggcttgacctcagccacttg cctctgagcagctccaccctggccgcgctcattcaaggactgagccacatgagcctcctg cagagcctccgtctaagcaggagcggcgttgatgacatcggctgctgccacctctccgag gcgctcagagctgccaccagcttggtggagctgggcttgagccacaaccagatcggagac gccggtgcccagcacttagctgccatcctgccagggctgcctgagctcaggaagatagac ctctcagccaatggcatcggcccggcagggggagtgcggttggcggagtccctcaccctt tgcgagcacctggaggagctgatgcttgactacaatgctctgggagatctcacagccctg gggctggcccgagggttgcctcagcacctgagggtcctgcacctgcggtccagccacctg ggcccagagggggcgctgagcctgggccaggcactggatggatgcccatacgtggaagag atcaacttggccgagaacagcctggctggagggatcccacatttctgtcaggggctcccg atgctccggcagatagacctgatgtcatgtgagattgacaaccagactgccaagcccctc gccgccagcttcgtgctctgcccagccctggaagaaatcatgctgtcctggaatctgctc ggtgacgaggcagctgctgagctggcccaggtcctgccgcggatgggccgactgaagaga gtggacctggagaagaatcggatcacagctcacggagcctggctcctggctgaagggctg gctcagggctctggcatccaagtcattcgcctgtggaataaccccatcccccaggacacg gcccagcatctgcagagccgggagcccaggctggactttgctttcttcgaccatcagcca caggtcccctgggatgcttga

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