Sus scrofa (pig): 100141305
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Entry
100141305 CDS
T01009
Symbol
RAD54L
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100141305 (RAD54L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssc03400
]
100141305 (RAD54L)
DNA repair and recombination proteins [BR:
ssc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
100141305 (RAD54L)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Rad54_N
Motif
Other DBs
NCBI-GeneID:
100141305
NCBI-ProteinID:
NP_001116655
Ensembl:
ENSSSCG00000003905
UniProt:
B0M1M8
LinkDB
All DBs
Position
6:complement(165156833..165184641)
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AA seq
747 aa
AA seq
DB search
MRRSLAPSQLAKRKPEVRPSDGEDWQPGAATPKKRKASSETQSQECFLSPFRKPLIQLTN
QPPCLDSSQHEAFIRSILSKPFKIPIPNYQGPLGSRALGLKRAGVRRALHDPLEEGALVL
YEPPPLSAHDQLKLDKEKLPVHVVVDPVLSKVLRPHQREGVRFLWECVTSRRIPGSHGCI
MADEMGLGKTLQCITLMWTLLRQSPDCKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQP
LAIDGGSKDEIDQKLEGFMNQRGARVPSPILIISYETFRLHVGVLQKGSVGLVICDEGHR
LKNSENQTYQALNSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGLLGTAHEFKKRFELP
ILKGRDAAASEEDRRLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQ
TELYKRFLRQAKPAEELREGKMSVSSLSSITSLKKLCNHPALIYDKCVEEEDGFAGALDF
FPPGYSSKALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKLCRARRYLY
VRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND
EQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGE
LKELFTLDEASLSDTHDRLRCRRCVNNQQVWPPPDGSDCTSDLAQWNHSTDKRGLADEVL
QAAWHAASTAITFVFHQRSHEEQRGLR
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggagcttagctcccagccagctggccaaaagaaagccggaagttagaccctct
gatggtgaagattggcaacctggagcagcgactcctaagaaacggaaagccagcagtgag
acccagagccaggagtgtttcctgtctcccttccggaaacctttgattcagctgacgaat
caaccaccgtgtctggacagcagtcaacatgaagcgtttattcggagcattctgtcaaag
cctttcaaaatccccattccaaattaccaaggtcctctgggctctcgagcattgggcctc
aaaagggccggggtccgccgggccctccatgaccccctggaagaaggtgccctggttctg
tacgagcctcccccactgagcgcccatgaccagctgaagcttgacaaggaaaagctcccc
gttcatgtggtcgtcgatcctgtcctcagcaaggtcttgaggcctcatcagagagagggc
gtgaggttcctgtgggagtgtgtcaccagccgccgcatccccgggagccacggctgcatc
atggccgacgagatgggcctgggcaagacgctgcagtgcatcacgctgatgtggacgctt
ttgcgccagagtccggactgcaagccggagattgataaggcagtggtggtgtcgccctcc
agcctggtgaagaactggtacaatgaagtggggaagtggcttggagggaggatccaacct
ctggccatcgatggaggatcgaaggacgagatagaccaaaaactggaaggattcatgaac
cagcggggagccagagtgccttctcccatcctcatcatttcctacgagaccttccgcctc
cacgttggggtcctccagaaagggagtgttggcctggtcatatgtgatgagggacacagg
ctgaagaactccgagaatcagacttaccaggccctgaacagcttgaacaccagccggcgg
gtgctcatctctgggacccccatccagaacgacctccttgagtatttcagcttggtccat
tttgttaattcgggcctcctaggaactgcccatgagttcaagaagcgttttgaactgccg
attctgaagggtcgagatgcagcggccagtgaggaagaccggcggctgggagaggagcga
ctgcgggagctcaccagcattgtgaacaggtgtctaatacggaggacatctgatatcctt
tctaaatacctgcctgtgaagattgagcaggtggtttgttgcaggctgacaccccttcag
actgaattatacaagaggtttttgagacaggccaagccagcagaagagttgcgtgagggc
aagatgagtgtgtcttctctctcttccatcacgtccctgaagaagctgtgtaaccatcca
gctctaatctatgacaagtgtgtggaagaggaagatggcttcgcaggtgccttggacttc
tttccccctggttatagctccaaggctttagagcctcagctgtcaggtaagatgctggtc
cttgattacattctggcggtgacccgaagccgcagcagtgacaaagtcgtgctggtgtcc
aattacactcagacattggacctctttgagaaactctgccgggcccgaaggtacctgtat
gttcgcttggatggcacaatgtccattaagaagcgagccaaggttgtggagcgcttcaac
agcccgtcgagtccagactttgtcttcatgctgagcagcaaagctgggggctgtggcctc
aatctcatcggggctaaccgcctggtcatgtttgaccctgactggaacccagccaacgat
gaacaagccatggcccgggtctggcgtgacggtcaaaagaagacctgctatatctatcgc
ctgctgtctgcaggaaccattgaggagaagatctttcagcgtcagagccacaagaaggca
ctgagcagctgcgtggtggacgaggagcaggatgtggagcggcacttctctctaggcgaa
ctgaaggagctctttaccctggatgaggccagcctcagtgacacacatgacaggttgcgc
tgccgtcgctgtgtcaacaaccagcaggtgtggccaccccccgacggttctgactgcacc
tcagacctggctcagtggaaccacagcactgataagcgggggctcgcggatgaggtactc
caggctgcctggcacgctgcctccactgccatcaccttcgtctttcaccagcgttcccac
gaggagcagcggggcctccgctaa
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