KEGG   Sus scrofa (pig): 100144453
Entry
100144453         CDS       T01009                                 
Symbol
MDC1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ssc03400]
    100144453 (MDC1)
DNA repair and recombination proteins [BR:ssc03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    100144453 (MDC1)
SSDB
Motif
Pfam: BRCT_2 FHA RTT107_BRCT_5 BRCT
Other DBs
NCBI-GeneID: 100144453
NCBI-ProteinID: NP_001116610
Ensembl: ENSSSCG00000001362
Vega: OTTSUSG00000001293
UniProt: Q767L8
LinkDB
Position
7:complement(23229508..23247739)
AA seq 2042 aa
MEDTQVINWEAEEEEVEEGPSEPLGCNLQPVGQLRIFSSSYGPEKDFPLYLGKNVVGRMP
ECSVALPFSSISKQHAVIEILAWNKAPVLRDCGSLNGTQILRPPKVLGPGVSHRLRNREL
ILFADLPCQYHRLDVPPPLVSRGPLTVEETPRGQGGTQPHRLLLAEDSEEEVDSLSERCV
VKGPKTSLTTVIPESDEEGPSPAPDGPGPPFAFNLNSDTDEEESQQPGAGEAPSAAETEQ
PKPVTTEIQLIKDQCPVKEKHKDARVKRAASNGVVPVGAILERSQPAGEDSDTDVDEGSG
LPRRPAGAHSERAQPCGFIDSDTDAEEEGIPATPAVVPVKKRQIFHEVGTESPQAPGVAH
AQESPAGSDTDIEEGEAPRTVPLDSSRASMMIDSNMDDEEEVSAALTLARLRESQAVPWN
RDAGAGDHRAQPVALLDQSQASAGRDSDTDMEEEGLPLEKRGSLPKGPADKAHPEKSQPP
LRGSDVKVEEDERSPGVHPGRSQASATVDAITQVEEKAPPRPAVTLSEQHQVPVAWTPQT
DVEAEGDPAKLPVVHPAEARPPPAGGHEPDVEKNTSLAASAGADVRKSQLLAEGDAGTEW
AVAILAQDRALGAGAQSVSARAQVGQDLPLVSREHLADVAVDTGAPGEATQTQREGTQAL
TERERELNVDRTIDSGDNRDDSEDLDLQATQCFVEGENQSPEAVPSMEDEPTQAFPSTLP
QEPGPSCCSFQASGTLDEPWELLATQPFCPRESEASEIQPVDTHLEARGLCPSPPRAALP
EQHPESPEPLGSQGGGRQTVEKATGTPRETAEGPTPERGPLERATKEPPSEGERGGMGEE
GLPRGTQDREEKQVLAGVTQRQESDRTVKSTSTDGGLESLQVEIETPKEMQENEIEKQTL
ARDMLEREAEKPVAERESEAGGPEVKVPEAVQDRGPLRAEAEGTSQDQKGQASNLTPEPG
AGVGYLQGLASAPAAPRSQAGGGGEAPVSPRRQQRGDLNCKMPPAEKSGVRAAFSPSLPS
PHGDQESPEACLPPEPPEASAPLQNPLPSQSPKHPAPQSRLSPPPPPLEQSTPRTRPPQS
QESPEPPFSSELDPPNPEPKVRPQGSPPLSPIPLEAHPTSPTDQAGSPEPTSRAARGGTH
RSFEVTPMSVVPTALELQSSTSADQPVVPKPTLRAPWGRTHRSSVKTPEPNIPTAPELQP
STPTDQPVAPEPLSRATRGRTPRASVKTSEPVVPAAPEPQPSTPTDQPVVPKPTLRAPRG
RTHRSSVKTPEPNIPTAPELRPSTPTDQPVAPEPLSRATRGRTPRASVKSPEQNVPTAPE
HPQPSTPTDQPVTPKPTSRATRGRAHRSSVKTPAASEPLPSASTDQPITPKPTSRGRAHR
SSAKTPELQPPTSTGQPVTPRPTSQATRGRTHRSSIKTPEPVVPTDPEPQPSTPTDQPIT
PELTSAATRGRTRRSSVKTPEPVVPTDPEPQPSTPTDQPITPKPTSWATRGQAHRSSVKT
PEPHVPTDPEPQPSTPTDQPVTPKPTSRATRGRARKSSVKTPEPAVPTAAEPQPSASTDQ
PITPKPTSRGRAHRSSAKTPELQPPTSTGQPFTPRPTSGATQGRTHRSSAKTSQAVEPTA
PDLEPPSPIGQPVTPKVIAEGGQNRILRSSRVGAVPGPTPPELQCPVPTEQPVPPEPIPR
ASCSRRPRATRKRESLTAHVGPDPCSAPPEPNSRSSRTQSLSTTPEPTLPQLPEAPAHAP
QIPKVEAAGRPGFTLEPQPKATQKRKRPLAPADSPPLPKRLQRGEVPPKTVILEEEENPT
ARPGREEDAVIPEPGKRKRDQTEEEPRGVPSRSLRRTKPAQESTAPRVLFTGVVDARGER
AVLALGGSLASSVAEASHLVTDRIRRTVKFLCALGRGIPILSLDWLHQSRKAGCFLPPDE
YVVTDPEQEKNFGFSLREALSRARERKLLEGYEIHVTPGVQPPPPQMGEIISCCGGTVLP
SMPRSYKPQRVVITCSQDFPRCSVPFRLGLPVLSPEFLLTGVLKQEAKPEAFVLSTLEMA
SA
NT seq 6129 nt   +upstreamnt  +downstreamnt
atggaggacacccaggttattaactgggaggctgaagaagaggaggttgaagagggaccc
agtgaacctttggggtgtaacttgcagcccgtagggcaactgcgtatcttcagtagttcc
tatggaccagaaaaagatttcccactctaccttgggaagaacgtggtgggccgaatgccc
gagtgctctgtggccctgcctttttcatccatctccaaacaacatgcagtgattgaaatc
ttggcctggaacaaggcgcctgtcctccgcgactgtgggagcctcaatggcactcagatc
ctgaggcctcccaaggtcctgggccctggggtgagtcatcgtttgaggaaccgggagttg
attctctttgctgacttgccctgccagtaccatcgcttggatgtccccccgcccttggtc
tctcggggccctctaactgtagaggagacacccaggggacagggaggaactcaaccgcac
aggcttctgttggctgaggactcagaggaggaagtagattctctttctgaaaggtgtgtg
gtgaaaggaccaaagacttctttgacaacagtgattccagagagtgatgaagaggggcct
tcccccgccccagatggccctggaccaccttttgccttcaacttgaacagtgacacggat
gaggaagaaagtcagcaaccaggagcaggagaggctccctcagctgcagagacagaacag
cctaaacctgtcacaaccgaaatccagctcataaaggaccagtgtccagtgaaggagaag
cacaaggacgcaagagttaagagggctgccagcaatggggtggttccagttggggcgatt
ctggagaggagccagcctgctggggaggacagtgacacagatgtggatgaggggagtggg
cttccacggaggccagctggagcccattcagaaagggcccagccttgtggcttcatagac
agtgatactgatgcggaagaagaggggatccccgccaccccagcagtagttcccgtgaag
aagaggcagatcttccatgaagttgggacagagagcccccaggcacctggcgtggcacat
gcacaggagagcccggctggtagtgatacagatatagaggagggagaggccccccggacg
gtccctctggacagcagccgagcctccatgatgatcgacagcaacatggatgacgaggaa
gaagtctcagcggcgctcactctggcacgtctgagagagagccaggctgttccatggaac
agagatgcaggtgcaggagaccacagggcccaacctgtggcccttctggatcaaagccag
gcctctgctgggagagacagtgacacagacatggaagaagaggggctccccctagaaaag
agaggaagtctccccaagggtcctgcagacaaggcccatccagaaaagagccagcctcct
ctcaggggcagtgacgtgaaggtggaggaagatgagcgctcacctggagtccacccaggg
agaagccaagcctctgccactgtggacgccatcacccaagtggaggagaaagccccacca
aggccagctgttacactttcagagcagcatcaggtgcctgtggcatggacacctcaaaca
gatgtggaggcagaaggcgacccagcaaagctgcctgtggtgcatccagcggaagcccgc
cctcctccagctgggggccatgaaccagatgtggaaaagaacacgtccttagcagcctca
gcaggggcagacgtcagaaagagccagcttctggcagaaggggatgctgggacggagtgg
gctgtagccattcttgcacaggaccgagctcttggggccggggcccagagtgtgtcagcc
agggcacaggtggggcaggaccttccccttgtctcaagagagcacctagcagatgtggcg
gtggacacaggcgctccaggggaagccacccagacacagagagagggaacccaggccctc
acagagagggagagagaactaaacgtggacaggaccatagactctggagacaaccgtgac
gattctgaagatctggacctgcaagccacccagtgctttgtggagggagagaatcagagc
ccggaagcagtccccagcatggaggatgagcccacccaggccttcccgtctactctgccc
caggagcctggcccttcctgttgcagcttccaggcctcaggtaccctggatgagccatgg
gagctcttagctacacagccgttctgtccaagagagtctgaggcctctgagatccagccc
gttgacacccacctggaggcccgtggcctttgcccctctccacctagggcagcactgcca
gagcaacacccagagagcccagagccactggggagtcagggtggagggcggcagactgtg
gagaaagccacgggtaccccgagagaaacagcagaggggccgacccctgagagagggccc
ctggagagggcaaccaaggagccgccatcagaaggagagaggggagggatgggagaggag
gggttacccagggggacacaggacagggaagaaaaacaggtgttagctggagttactcag
agacaagagtctgacagaacagtgaaaagtacaagcactgacgggggcctggagagtttg
caggtagaaattgagacacccaaggaaatgcaagagaatgagatagaaaagcagactctt
gcaagagacatgctggagagggaagcagagaaacctgtagcagagagagagagtgaggca
ggtgggccagaagtaaaggtgcccgaagccgtacaggacagaggcccactgagagcggag
gcagaggggaccagccaggaccagaaaggccaggcctccaatctgacaccagagcctgga
gcgggggtggggtaccttcagggacttgcttcagccccagcagctccccggagccaggca
ggtggaggaggggaagccccagtgagccccaggagacagcagagaggtgacttgaattgc
aagatgccacctgctgagaagtctggggtgagagctgctttctctccctccctccccagc
ccgcatggtgatcaggaatccccggaggcttgtctgcctcctgaaccgcctgaagcgtca
gccccactccagaaccctctcccctctcagagcccaaagcatcctgcacctcaatcccgc
ctgtccccccctccccctcctttagaacagtccactcccaggaccaggccacctcagagt
caggagtccccagagcctcccttttcctcagagctggaccctcccaacccagaacccaaa
gtcaggccccaggggtcccctccactttctcctatacccctcgaggcccaccctacctcc
cccacagaccaggccggcagccctgagcccacatctcgggccgctcgtggcgggacacat
aggtcctttgaagtgacccccatgtcagttgtccccacagcccttgagctgcagtcctcc
acctccgcagaccagcctgtggtccccaagcccacacttcgggctccttggggcaggaca
cataggtcctccgtcaagacccctgaaccaaatatccccacagcccctgagctccagcct
tccacccccacagaccagcctgttgcccctgagcccttatctcgggccactcggggccgg
acacctagggcctctgtcaagacttctgaaccagttgtccctgcagcccctgagccccag
ccttccacccccacagaccagcctgtggtccccaagcccacacttcgggctcctcggggc
aggacacataggtcctccgtcaagacccctgaaccaaacatccccacagcccctgagctc
cgaccttccacccccacagaccagcctgttgcccctgagcccttatctcgggccactcgg
ggccggacacctagggcctctgtcaagtcccctgaacaaaatgtccccacagcccctgag
cacccacagccttccacccccacagatcagcctgtcacccccaaacccacatctcgtgcc
actcggggcagggcacacaggtcctctgtcaagacccccgcagcctctgagcccctgcct
tctgcctccacagaccagcccatcacccccaaacccacatctcggggcagggcacatagg
tcttctgccaagacccctgaactccagcctcccacctccactggtcagcctgtcaccccc
agacccacatctcaggccactcggggcaggacacataggtcctccatcaagacccccgaa
ccagttgtccctacagaccctgagccccagccctccacccccacagaccaacccatcacc
cctgagctcacatctgcagccactcggggcaggacacgtaggtcctctgtcaagacccct
gaaccagttgtccctacagaccctgagccccagccctccacccccacagaccagcccatc
acccccaaacccacgtcttgggctactcgaggccaggcacataggtcctctgtcaagacc
cctgaaccacatgtccccacagaccctgagccccagccctccacccccacagaccagcct
gtcacccccaaacccacatctcgtgcaactcggggcagggcacgtaagtcctctgtcaag
acccctgaaccagctgtccctacagccgctgagccccagccttctgcctccacagaccag
cccatcacccccaaacccacatctcggggcagggcacataggtcttctgccaagacccct
gaactccagcctcccacctccactggtcagcctttcacccccagacccacatctggggcc
acccagggcaggacacacaggtcttctgccaagacatcccaagcagttgaacccacagcc
cctgaccttgaacctccctcccccataggccagcctgtcacccccaaggtcatagctgag
ggtggtcagaacaggatactcagatcttctagagtaggtgctgtgccaggtcctaccccc
cctgaactccagtgtcctgtccccacagaacagcctgttccccctgagcccatccctcga
gccagttgcagcaggaggcctcgggccactaggaagcgggagtctctcacagctcacgtt
ggtcctgacccctgctctgctccccctgaacctaattcccggtcctcaaggacccagtcc
cttagcaccactcctgagcctaccctccctcagcttcctgaggcaccggctcatgctccc
cagatcccaaaggtggaggcagcaggtagacctggcttcaccctagagccccagccgaag
gccacccaaaagcgcaagaggcctttggctcctgcagattcacccccacttccaaaacgg
ctccaaagaggggaagtgcccccgaagacagtgatcctcgaggaagaagaaaatcctaca
gcaaggcctgggagagaagaggatgcagtgattccagaaccaggcaagagaaagagagac
cagaccgaggaggagccccggggagtaccgagccgcagcctgcgccggaccaaacctgca
caagagtccacggcccccagagtgctcttcacgggtgtggtggatgctcgtggagagcgg
gcggtgctggccctggggggcagtctggccagctcagtggccgaggcgtcccatttggtg
accgatcggatccgccggacagtcaagttcctgtgtgccctggggcggggcatccccatc
ctctccctggactggctgcatcagtcccgcaaggcaggttgcttcttgcctccagatgag
tatgtggtgactgatcctgagcaggagaagaactttggcttcagcctccgggaggccctg
agccgggctcgggagagaaagctgctagagggctatgagattcacgtgaccccaggagtc
cagccaccgccccctcagatgggagagatcatcagctgctgtgggggcaccgtcctaccc
agcatgccccgctcctataagcctcagagagttgtgatcacgtgctcccaggacttccct
cgatgctccgttccatttcggcttgggctgcctgtcctctcacctgagttcctgctgaca
ggagtcctgaagcaggaggccaagccagaggcctttgtcctctccactttggaaatggca
tctgcctga

DBGET integrated database retrieval system