Sus scrofa (pig): 100144457
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Entry
100144457 CDS
T01009
Symbol
VARS2
Name
(RefSeq) valine--tRNA ligase, mitochondrial precursor
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100144457 (VARS2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ssc01007
]
100144457 (VARS2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssc03016
]
100144457 (VARS2)
Enzymes [BR:
ssc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
100144457 (VARS2)
Amino acid related enzymes [BR:
ssc01007
]
Aminoacyl-tRNA synthetase
Class I (U)
100144457 (VARS2)
Transfer RNA biogenesis [BR:
ssc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
100144457 (VARS2)
Prokaryotic type
100144457 (VARS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
FmiP_Thoc5
DUF7801
Motif
Other DBs
NCBI-GeneID:
100144457
NCBI-ProteinID:
NP_001116686
Ensembl:
ENSSSCG00000001384
Vega:
OTTSUSG00000001301
UniProt:
Q767M3
LinkDB
All DBs
Position
7:23404400..23416442
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AA seq
1062 aa
AA seq
DB search
MPHLPLASFRPPLRGLRPTRCFPRSHSLSTQSEPHGSPISRRNREAKQKRLREKQAALET
GIAAKGKPPAESTKAWTPKEIVLYEIPTEHGEKKDVSRPLPPAYSPRYVEAAWYPWWVRE
GFFKPEYQTRLPQATGETFSMCIPPPNVTGSLHIGHALTVAIQDALVRWHRMRGDRVLWV
PGSDHAGIATQAVVEKKLWKERGLRRRELSREDFLREVWKWKEEKGGEICQQLRVLGASL
DWDRECFTMDAGSSVAVTEAFVRLYKAGLLYRSRQLVNWSCALRSAISDIEVESRPLSGR
TELRLPGCPTPVSFGLLVSVAFPVDGEPDAEVVVGTTRPETLPGDVAVAVHPDDARYTHL
HGRQLHHPLTGQLLPLITDCAVQPHLGTGAVKVTPAHSPADAELGARHGLSPLSVIAEDG
TMTSLCGDWLQGLHRFVAREKIVSALRERGLFRGLQNHPMVLPICSRSGDVVEYLLKSQW
FVRCQEMGEQAAKAVVSGALELSPSFHQKNWQHWFSHIGDWCVSRQLWWGHRIPAYLVVE
ERAKGNTEDCWVVGRTEAEAREVAAELTGRPGAELTLERDPDVLDTWFSSALFPFSALGW
PQETPDLARFYPLSLLETGSDLLLFWVGRMVMLGTQLTGQLPFSKVLLHSMVRDRQGRKM
SKSLGNVLDPRDIINGVELQVLQEKLRDGNLDPAELAIAAAAQKKDFPHGIPECGTDALR
FTLCSHGVLGGDLHLSVSEVLSFRHFCNKIWNALRFILNALGEKFIPQPLEELCPTSPMD
AWILSCLARTAQECERGFLTRELALVTHALHHFWLHNLCDVYLEAVKPVLSHSPRPPGPP
QVLFSCADVGLRLLAPLMPFLAEELWQRLPLRPGNTTAPSICVAPYPSAHSLEHWHQPEL
ERRFSRVQEAVQALRALRATYQLTKARPRVLLQTSEPGEQGLFEAFLGPLSTLGHCGAVG
FLPPGAAAPSSWAQASLSDTAQVYMELQGLVDPQTHLPRLAARRQKLQKQLDSLLARTPS
EGEAESQSQQRLSSLQLELSKLDKAASHLRQLMDASPSPGEL
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgcctcacttgcctctggcttcctttcgaccaccgcttaggggactgaggcccactcgg
tgcttccccaggtcccattccctttccactcagtcagagccccatggatcacccatctca
cggagaaaccgtgaagccaaacagaagcgcctgcgagagaagcaggcggcgctggagact
ggcatagcagcaaagggcaagccacctgcagaatccactaaggcctggactcctaaggag
atagtgttgtatgaaatccccacggaacacggtgaaaagaaagatgtctcccggcccctg
cctcctgcatacagcccccggtatgttgaggctgcctggtacccatggtgggtgcgagag
ggcttcttcaaaccagaatatcagaccaggctgcctcaggctacaggggagaccttttcc
atgtgtatcccaccccctaacgtcactggctccctgcacatcgggcacgccctgacggtg
gccatacaggatgccctcgtgcgctggcaccggatgcgtggggatcgggtgctgtgggtc
cctggctcagatcatgcagggattgctactcaagctgtggtggagaaaaagctgtggaag
gaacgagggctgaggagacgtgagctgagccgagaagacttccttagggaggtgtggaag
tggaaggaggagaagggtggagagatctgtcagcagctccgcgtgctgggggcctccctg
gactgggaccgagaatgttttaccatggatgctggctcctcagtggctgtgacggaagct
tttgtgcggctctacaaggctgggctgttgtaccggagccggcagcttgtcaactggtct
tgcgccttacgatctgccatctcagatattgaggtggagagccggcctctgtctggccgc
acggagcttcggctgcctggctgccccacccccgtatctttcggcctccttgtttctgtg
gccttccccgtggatggagagcctgacgcagaggttgtggtaggaaccacgaggccagag
acactgcctggagacgtggccgtggccgtccatcctgacgacgcccgatacacacatctg
catgggcgacaacttcatcatcccttaacggggcagcttctccccctcatcacagactgc
gctgttcagccacacctgggcacaggggcagtgaaggtgactccagctcacagccctgct
gatgctgaactgggggcccgacatggcttgagccccctgagtgtcatcgcagaggatggg
accatgacctcgctctgcggggactggctgcagggtcttcaccgatttgtggcccgggaa
aagattgtatcagcgctgagggagaggggcctgttccggggcctccagaaccaccccatg
gtgctgcccatttgcagccgttccggggatgtggtggaatatctcctgaagagccagtgg
tttgtccgctgccaggaaatgggggagcaagcagctaaggcagtggtgtcgggggccctg
gagctcagtccctccttccaccagaagaactggcagcactggttttcccacattggggac
tggtgtgtctcccggcagctgtggtggggccatcggattccagcctacctggttgtagag
gagcgtgcaaagggcaacacggaggactgttgggtggtcgggcggacagaggccgaggcc
agagaagtagctgcagaactgacagggagaccaggggccgagctgaccctggagagggac
cctgatgtcctggacacatggttctcctcggctcttttccccttttctgccctggggtgg
ccccaagagaccccagacctggctcgtttctaccccctgtcacttttggaaactggcagt
gaccttctgctattctgggtgggccgtatggtcatgctgggaacccagctcacagggcag
ctccccttcagcaaggtgctgcttcactccatggttcgggacaggcagggccggaagatg
agcaagtccctggggaatgtgctggacccacgggacatcattaatggggtggagctgcag
gtactgcaggaaaaactgagagatgggaacttggaccctgcagagctggcgatcgcggct
gcagcacaaaaaaaggacttccctcacgggattcctgagtgtggaaccgatgccttgaga
ttcaccctgtgctcccatggggtcctgggaggcgacttgcacctttctgtttctgaggtc
ctgagcttccgacatttctgcaacaagatctggaatgccctgcgctttatcctgaatgcc
ctcggggagaaattcataccccagcccctagaggagttgtgccccacctcccccatggac
gcctggatcctgagctgcctggcccgcactgcccaagagtgtgagcggggcttcctcacc
cgtgagcttgcgcttgtcacccacgccctgcaccacttctggctccacaacctctgtgat
gtctacttggaggctgtgaagccggtgctgtcccactcacctcgtcccccagggccacct
caggtcctcttctcctgtgctgacgttggtctccgcctccttgccccgctgatgcccttc
ctggctgaagagctgtggcagaggctgcccctgaggcctggcaacaccactgcccccagc
atctgtgttgccccctaccccagtgcccacagcttggagcactggcaccagcccgagctg
gagcggcgcttctcccgagtccaggaggccgtgcaggcgctgagggctctccgcgccacc
taccagctcaccaaggcccggccccgagtgctgctgcagacctcagagccaggagagcag
ggcctctttgaggccttcctggggccgctgagcaccctgggccactgtggggccgtgggc
tttctgcccccaggtgcagcagccccctccagctgggcccaggcctctctcagtgacacg
gctcaggtctacatggagctgcagggcctggtggacccccagacccacctgccgcggcta
gctgcccgaagacagaagttgcagaagcagcttgacagcctcctagcccggaccccatca
gagggggaggcagagagtcagagtcagcagaggctttcttccctccagctggaattgtca
aaactggacaaggcggcttctcacctccggcagctgatggatgcgtctcccagccctggg
gagctctga
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integrated database retrieval system
