Sus scrofa (pig): 100144505
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Entry
100144505 CDS
T01009
Symbol
HPCA
Name
(RefSeq) neuron-specific calcium-binding protein hippocalcin
KO
K23846
neuron-specific calcium-binding protein hippocalcin
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ssc04990
]
100144505 (HPCA)
Domain-containing proteins not elsewhere classified [BR:
ssc04990
]
EF-hand domain-containing proteins
Calcium binding proteins
100144505 (HPCA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_8
EH
SPARC_Ca_bdg
FCaBP_EF-hand
WEF-hand
SPEF2_C
Motif
Other DBs
NCBI-GeneID:
100144505
NCBI-ProteinID:
NP_001116597
Ensembl:
ENSSSCG00000003663
UniProt:
Q06AT1
LinkDB
All DBs
Position
6:89187544..89197049
Genome browser
AA seq
193 aa
AA seq
DB search
MGKQNSKLRPEMLQDLRENTEFSELELQEWYKGFLKDCPTGILNVDEFKKIYANFFPYGD
ASKFAEHVFRTFDTNSDGTIDFREFIIALSVTSRGRLEQKLMWAFSMYDLDGNGYISREE
MLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNNDGKLSLEEFIRGAKSDPSIV
RLLQCDPSSASQF
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagcagaacagcaagctgcggccagagatgctgcaggacctgcgggagaacacg
gagttctcggagctggagctgcaggagtggtacaagggcttcctcaaggactgccccaca
ggcatcctcaacgtggacgagttcaagaagatctacgccaacttcttcccctacggcgac
gcctccaagttcgccgagcatgtcttccgcaccttcgacaccaacagcgacggcaccatc
gacttccgggagttcatcatcgcgctgagcgtgacctcgcgtggccgcctggagcagaag
ctcatgtgggccttcagcatgtacgacctggacggcaacggctatatcagccgcgaggag
atgctggagatcgtgcaggccatttacaagatggtttcttccgtgatgaagatgccagag
gacgagtcgaccccggaaaagaggacggagaaaatcttccgccaaatggatacaaacaac
gacggcaagctgtccctggaggagttcatccgcggggccaaaagcgacccgtccatcgtg
cgtctgctgcagtgcgaccccagcagcgcctcccagttctga
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