Sus scrofa (pig): 100144536
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Entry
100144536 CDS
T01009
Symbol
VAPB
Name
(RefSeq) vesicle-associated membrane protein-associated protein B
KO
K10707
vesicle-associated membrane protein-associated protein B
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04979
Cholesterol metabolism
ssc05014
Amyotrophic lateral sclerosis
ssc05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09150 Organismal Systems
09154 Digestive system
04979 Cholesterol metabolism
100144536 (VAPB)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100144536 (VAPB)
05022 Pathways of neurodegeneration - multiple diseases
100144536 (VAPB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100144536 (VAPB)
Membrane trafficking [BR:
ssc04131
]
Autophagy
ER-phagy
Other ER-phagy associated proteins
100144536 (VAPB)
Other autophagy associated proteins
ER-mitochondria tethering complex
100144536 (VAPB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Motile_Sperm
LcrG
ZapB
Ig_CFAP65_4th
bZIP_1
Com_YlbF
GIT_CC
Cep192_D3
Cep192_D6
DUF3231
DUF6262
Phage_GPO
EMC3_TMCO1
GAT
Motif
Other DBs
NCBI-GeneID:
100144536
NCBI-ProteinID:
NP_001116685
Ensembl:
ENSSSCG00000007514
Vega:
OTTSUSG00000000599
UniProt:
A5GFS8
LinkDB
All DBs
Position
17:58594749..58644925
Genome browser
AA seq
243 aa
AA seq
DB search
MAKVEQVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGI
IDAGASINVSVMLQPFDYDPNEKSKHKFMVQSMFAPADTSDMEAAWKEAKPEDLMDSKLR
CVFELPAENDKPHDVEINKIISTTASKTETPVVSKALSSALDDTEVKKVMEECKRLQSEV
QRLREENKQLKEEDGLRMRKPVLSNSPAPAPATPGKEEGLSTRLLALVVLFFIVGVIIGK
IAL
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaggtggagcaggtcctgagcctcgagccgcagcacgagctcaaattccgaggt
cccttcaccgacgtggttaccaccaacctaaagctcggcaacccgacagaccggaatgtg
tgtttcaaggtgaagaccacggccccacgtaggtactgcgtgaggcccaacagtgggatc
attgacgcgggggcctccatcaatgtatctgtgatgttacagcctttcgattatgatccc
aatgagaagagtaaacacaagtttatggttcagtctatgtttgctccagctgacacttct
gatatggaggcagcttggaaggaggcaaaaccggaagaccttatggattcaaaacttaga
tgtgtgtttgaattgccagcagaaaatgataaaccacatgatgtagaaataaataaaatt
atatccacaactgcatcaaagacagaaacgccagtggtgtctaaagccctgagttccgct
ctggacgacaccgaagtgaagaaggtgatggaagagtgtaagcggctgcagagcgaggtc
cagaggctgcgggaggagaacaagcagttgaaggaggaagacggccttcggatgaggaag
cccgtgctgagcaacagccctgcgcccgcgcccgccacgcctgggaaggaggagggcctc
agcacgaggctgctggcgctggtggttttgttcttcatcgtgggcgtgatcatagggaag
atcgccttgtag
DBGET
integrated database retrieval system
