Sus scrofa (pig): 100151864
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Entry
100151864 CDS
T01009
Symbol
SMC3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04110
Cell cycle
ssc04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
100151864 (SMC3)
04114 Oocyte meiosis
100151864 (SMC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssc03036
]
100151864 (SMC3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ssc00535
]
100151864 (SMC3)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
100151864 (SMC3)
Meiosis-specific proteins
Cohesin complex and associated proteins
100151864 (SMC3)
Proteoglycans [BR:
ssc00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
100151864 (SMC3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
100151864
NCBI-ProteinID:
XP_005671509
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All DBs
Position
14:120969629..121008924
Genome browser
AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKEKNLEQYNKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLDHFRRKGINQHVQNGYHGIVMNNF
ECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELEAINKRVKDTMARSEDLDNSIDKTEAGIKELQKS
MERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSGESERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEMAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacataaagcaggttattatccagggatttcgaagttacagagatcaaacaattgta
gaccccttcagttcaaaacataatgttattgtgggcagaaatggatctggaaaaagtaac
ttcttttatgcaattcagtttgttctcagtgatgaatttagtcatcttcgtccagaacag
cgattggctttgctgcatgagggtactggtcctcgtgttatttctgcttttgtggagatt
atttttgacaattcagacaaccggttgccaatcgacaaagaggaagtttcacttcgaaga
gttattggtgccaaaaaagatcagtatttcttagacaaaaaaatggtcacgaaaaatgat
gtgatgaatctccttgaaagtgctggtttttctcgaagcaatccttactatattgttaaa
caaggaaagatcaaccagatggcaacagcaccagattctcagaggctaaaactattaaga
gaagtagctggtactagagtatatgatgaacgaaaagaagaaagcatctctttaatgaag
gaaacagagggcaaacgggaaaaaatcaatgagttgttaaaatacattgaagagagatta
cataccttagaggaagaaaaggaagaactagctcagtatcagaagtgggataaaatgaga
cgagccctggaatataccatttacaatcaggaacttaacgagactcgtgctaaacttgat
gagctttctgctaaacgagagacgagtggagaaaaatccagacaattaagagatgcccag
caggatgcaagagataaaatggaggatattgaacgccaagttagagaactgaaaacaaaa
atttcagctatgaaagaagaaaaggagcagctcagcgctgaaagacaagaacaaattaag
cagaggactaagttggagcttaaagccaaggatttacaagatgaattagcaggcaatagt
gaacagaggaaacgcttattaaaagaaaggcagaagctgcttgaaaaaatagaagaaaaa
cagaaagaactggcagaaacagaacctaaattcaacagtgtaaaagaaaaagaagagcga
ggaattgccagattggcccaagctacccaggaaagaacggacctttatgcaaagcagggt
cgaggaagccagtttacatcaaaagaagaaagggataagtggattaaaaaggaactcaag
tctttagatcaggctattaatgacaagaaaagacaaattgctgctatacataaggatttg
gaggacactgaggcaaataaagagaaaaatctggagcagtataataaacttgatcaggat
cttaatgaagtcaaagctcgagtagaagaactggacagaaaatactatgaagtaaaaaat
aagaaagatgaattacaaagtgaaagaaattacttgtggcgagaggagaatgcagaacag
caagcacttgctgctaaaagagaagatctagaaaagaaacagcaacttcttagagcggca
acaggaaaggccattttaaatggaatagacagcatcaacaaagtactagaccactttcgt
cgaaaaggaataaaccaacatgttcagaatggctatcatggtattgtgatgaataacttt
gaatgtgagcctgctttctacacatgtgtggaagtcactgctggaaaccggttattttat
cacattgttgattcagatgaagtcagcacgaagattttgatggagtttaataaaatgaac
cttcctggagaggttacttttctgcctcttaacaagttagatgtcagggatactgcctat
cctgaaaccaatgatgctattcctatgataagtaaattgaggtacaatcccagatttgac
aaggctttcaaacatgtgtttggaaaaacacttatttgtcgtagtatggaagtttcaacc
cagttggcccgtgctttcacaatggactgcattaccctggaaggtgaccaagttagtcat
cggggtgctttaactggaggctattatgatacaaggaagtctagacttgaattacaaaaa
gatgttagaaaagcagaagaagaactaggtgaacttgaagcaaagctcaatgaaaacctg
cgcagaaatattgaaaggattaataatgaaattgatcagctgatgaaccaaatgcagcag
atagagacccagcaaaggaaatttaaagcatctagagatagcatattatcagaaatgaag
atgctgaaagagaagaggcagcagtcagagaaaacctttatgcccaagcaacgtagctta
caaagtttggaggccagtttgcatgctatggagtccaccagagaatcattgaaagcagaa
ctgggaactgatttgctttctcaacttagtctggaagatcagaagagagtagatgcactg
aatgatgaaattcgtcaacttcagcaggaaaacagacagctgctgaatgaaaggattaaa
ttagagggtattattactcgggtagagacttatctcaacgagaatttgagaaagcgcttg
gaccaagtagaacaggaactcaatgaactgagagagacagaagggggtactgttctcact
gctacaacctcagaacttgaagccatcaataaaagagtaaaagataccatggcacgatca
gaagatttggacaattccatcgataagacagaagctggaattaaggagttgcagaagagt
atggagcgctggaaaaatatggaaaaagaacacatggatgctataaatcatgatactaaa
gaactagaaaagatgacaaaccgacaaggcatgctactgaagaagaaagaagagtgtatg
aagaaaattcgagaacttggatcacttccccaggaagcatttgaaaaataccagacactg
agcctcaaacagttgttccgaaaacttgaacaatgcaacacagaattgaagaagtacagc
catgttaacaaaaaagctttagatcagtttgtaaatttctctgagcagaaagaaaagtta
ataaagcgacaggaagagttggatagggggtacaaatcaatcatggaactgatgaatgta
cttgaacttcgaaaatatgaagctattcagttaactttcaaacaggtatccaaaaacttc
agtgaagtattccagaagttggtacctggtggcaaagctactttggtgatgaagaaagga
gatgtggagggcagtcagtctcaggatgaaggagaagggagtggtgaaagtgagaggggc
tctggatcacaaagcagtgttccatcagttgaccagttcacaggagttggaattagggtg
tcatttacaggaaaacaaggtgaaatgagagagatgcagcagctttcaggtggacagaaa
tccttggtagctcttgctctgatttttgccattcagaaatgtgacccagctcctttttac
ttgtttgatgagattgaccaggccctagatgctcagcacagaaaggctgtgtcagatatg
attatggaacttgctgtacatgctcaattcattacaactacttttaggcctgaattgctt
gagtcagctgacaaattctatggtgtaaagttcagaaataaggttagtcatattgatgtg
atcacagcagaaatggccaaagattttgtggaagatgataccactcatggttaa
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