KEGG   Sus scrofa (pig): 100151951
Entry
100151951         CDS       T01009                                 
Symbol
TUBA4A
Name
(RefSeq) tubulin alpha-4A chain
  KO
K07374  tubulin alpha
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04145  Phagosome
ssc04210  Apoptosis
ssc04517  IgSF CAM signaling
ssc04530  Tight junction
ssc04540  Gap junction
ssc04814  Motor proteins
ssc05010  Alzheimer disease
ssc05012  Parkinson disease
ssc05014  Amyotrophic lateral sclerosis
ssc05016  Huntington disease
ssc05020  Prion disease
ssc05022  Pathways of neurodegeneration - multiple diseases
ssc05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    100151951 (TUBA4A)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100151951 (TUBA4A)
  09143 Cell growth and death
   04210 Apoptosis
    100151951 (TUBA4A)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    100151951 (TUBA4A)
   04540 Gap junction
    100151951 (TUBA4A)
  09142 Cell motility
   04814 Motor proteins
    100151951 (TUBA4A)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    100151951 (TUBA4A)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100151951 (TUBA4A)
   05012 Parkinson disease
    100151951 (TUBA4A)
   05014 Amyotrophic lateral sclerosis
    100151951 (TUBA4A)
   05016 Huntington disease
    100151951 (TUBA4A)
   05020 Prion disease
    100151951 (TUBA4A)
   05022 Pathways of neurodegeneration - multiple diseases
    100151951 (TUBA4A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssc03019]
    100151951 (TUBA4A)
   03036 Chromosome and associated proteins [BR:ssc03036]
    100151951 (TUBA4A)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ssc04812]
    100151951 (TUBA4A)
   04147 Exosome [BR:ssc04147]
    100151951 (TUBA4A)
Messenger RNA biogenesis [BR:ssc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100151951 (TUBA4A)
Chromosome and associated proteins [BR:ssc03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     100151951 (TUBA4A)
Cytoskeleton proteins [BR:ssc04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    100151951 (TUBA4A)
Exosome [BR:ssc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100151951 (TUBA4A)
  Exosomal proteins of other body fluids (saliva and urine)
   100151951 (TUBA4A)
  Exosomal proteins of colorectal cancer cells
   100151951 (TUBA4A)
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 100151951
NCBI-ProteinID: XP_001928370
Ensembl: ENSSSCG00000016215
UniProt: A0A4X1UG19 A0A286ZNY1
LinkDB
Position
15:complement(121290149..121294048)
AA seq 448 aa
MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGK
HVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLD
RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGIDSYEDEDEGEE
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgcgtgaatgcatctcagtccatgttgggcaggcaggtgtccagatgggcaatgcctgc
tgggagctctactgtctggaacatgggatccagccggatgggcagatgcccagtgacaag
accattggtggaggagacgactccttcaccaccttcttctgtgaaactggtgctggaaag
catgtgccccgggcagtttttgtggatttggagcccaccgtgattgatgagatccgaaat
ggcccctaccggcagctcttccacccagagcagctcatcactgggaaagaggatgcggct
aacaactatgcccgtggtcactacaccatcggcaaggaaattattgacccggtactggac
cggatccgcaagctgtctgatcagtgcacaggacttcagggcttcctggtgttccacagc
tttggaggcggcaccggctctggcttcacctcgctcctgatggagaggctctctgttgac
tacggcaagaaatccaagctcgagttctccatctaccccgccccgcaggtgtccacagcc
gtggtcgagccctacaactccatcctgaccacccacaccaccctggagcactcagactgt
gccttcatggtggacaacgaagccatttacgacatctgccgccgcaacctggacatcgag
cgtcccacctacaccaacctcaaccgcctcatcagccaaatcgtctcctccatcacagcg
tccctgcgctttgacggggccctcaacgtggacctgacggagttccagaccaacctggtg
ccctaccctcgcatccacttcccgctggccacctatgcaccagtcatctctgcagagaag
gcctaccacgagcagctgtcggtggcagagatcaccaacgcctgcttcgagcctgccaac
cagatggtgaagtgtgatccccgtcatggcaagtacatggcctgctgcctgctgtaccga
ggagacgtggtgcccaaggatgtcaatgccgccatcgctgccatcaagaccaagcgcagt
atccagtttgtggactggtgccccacgggcttcaaggttggtatcaactaccagcccccc
accgtagtgcccgggggtgacctggccaaggtgcagcgtgccgtgtgcatgctgagcaac
acgaccgccatcgccgaggcctgggcccgcctagaccacaagttcgacctgatgtatgcc
aagagggcgtttgtgcactggtacgtgggcgagggcatggaggagggcgagttctctgag
gcccgggaggatatggctgccctggagaaggattatgaggaggtgggtatcgactcctat
gaggacgaggatgagggagaagaatag

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