Sus scrofa (pig): 100152043
Help
Entry
100152043 CDS
T01009
Symbol
TRAPPC9
Name
(RefSeq) LOW QUALITY PROTEIN: trafficking protein particle complex subunit 9
KO
K20306
trafficking protein particle complex subunit 9
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100152043 (TRAPPC9)
Membrane trafficking [BR:
ssc04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
100152043 (TRAPPC9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC9-Trs120
Vps23_core
Motif
Other DBs
NCBI-GeneID:
100152043
NCBI-ProteinID:
XP_020944520
LinkDB
All DBs
Position
4:3065254..3533670
Genome browser
AA seq
1147 aa
AA seq
DB search
MSVPDYMQCAEDHQTLLVVVQPVGIVSEENFFRIYKRISSVSQISVRDSQRVLYIRYRHH
YPPENNEWGDFQTHRKVVGLITITDCFSAKDWPQTFEKFHVQKELYGSTLYDSRLLVFGL
QGEIAEQPRTDVAFYPSYEDCATVEKRIEDFIESLFIVLESKRLDRATDKSGDKIPLLCV
PFEKKDFVGLDTDSRHYKKRCQGRMRKHVGDLCLQAGMLQDSLVHYHMAVEFLRSVNDFL
WLGAALEGLCSASVIYHYPGGTGGKTGARRFQGSSLPAEAANRHRPGAQEVLIDPGALST
NGINPDTSTEIGRAKNCLSPEDIIEKYKEAISCYGKYKNAGVIELEACVKAVRVLAIQKR
SMEASEFLQNAVYINLRQLSEEERIQRYSILSELYELIGFHRKSAFFKRVAAMQCVAPSI
AEPGWRACYKLLLETLPGYSLSLDPQDFNKGTHRGWAAVQMRLLHELVYASRRMGNPALS
VRHLSFLLQTMLDFLSDQEKKDVTQSLENYTSKCPGTMERITLPDGLTLPPWPXTKLPIV
RCVKLLSLPASLRPQKMKSLLGQSVSAKSPFIYSPITVHSRGEERSGKIDFQWVQGDVCE
VQLMVYNPMPFELRVENMGLLTSGVEFESLPAALSLPAESGLYPVTLVGVPQTTGTITVN
GYHTTVFGVFSDCFLDNLPGVKTGGSTVEVIPALPRLQISTSLPRSAHSLQPSSGDEVST
NVSVQLYNGETQHLVVKLENIGMEPLEKLEVTSKILTTKEKLYGDFLSWRLEETLAQFPL
QPGKVATLTVCIKVKLDFSCQENLLQDLSDDGISVSGFPLCSPSRQVVRPRADSKPANPA
EGSRPGDPGHVKTLEAILNFKYSGGPGHVEGYYRSLALGLHVEVEPSVFFTRVSTLPATS
TRQCHLLLDVFNSTEHELTVSARSNEELILHAGECQRMAIQVDKFNFESFPESPEEKGQS
ANSKQLEEERQEARGLEINSKLGIRWTIPSLKRTGEASVEGLLNQLVLGHLQLAPLLWDV
LVDGQPCDHEAAACRVGDPVRLEVRLTNRSPRSVGPFALSVVPFQDHQNGVHNYDLHHAV
SFVGSGTFYLDKVPPSGQAACLGALLFLYTGDFFLHVRFHEDSSSKELPPSWFCLPSVHV
RALEAQA
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcccggactacatgcagtgcgcggaggaccaccagaccctgctcgtggtggtg
cagccggtggggatcgtctcggaggagaacttcttccggatctacaagcggatctcgtcc
gtgagccagatcagcgtgcgcgactcgcagcgcgtgctctacatccgctaccggcaccac
tacccgcccgagaacaacgagtggggcgacttccagacccaccgcaaggtcgtgggcctc
atcaccatcaccgactgcttctcggccaaggactggccgcagaccttcgagaagttccac
gtgcagaaggagctctatggctcgaccctctacgactcgcggctcctggtcttcgggctg
cagggggagatcgcggagcagccgcgcacagacgtggccttctaccccagctacgaggac
tgcgcgacggtggagaagcggatcgaggacttcatcgagtccctcttcatcgtgctcgag
tccaagcgtctggaccgggccacggacaagtccggggacaagatccccctcctgtgcgtc
ccctttgagaagaaggacttcgtggggctggacacggatagtagacattacaagaagcgg
tgccaggggcgcatgcggaagcacgtgggggatttatgcctgcaggccgggatgctgcag
gactccctggtccattaccacatggccgtggagttcctccggtccgtgaatgactttttg
tggctcggagctgccctcgaagggttgtgttcggcttctgtcatctatcactatcctggg
ggaaccggcggtaaaactggagctcgaaggttccagggtagctccctacctgccgaagca
gccaacaggcatcgaccaggggcacaagaagttctcattgacccaggtgccctcagcacc
aacggcatcaatccagacaccagcacggaaattggacgcgccaagaactgcctcagccct
gaagacatcatcgaaaagtacaaggaggccatctcctgttacggcaagtacaagaatgct
ggagtgattgagttagaagcttgtgtcaaagccgtccgcgtcctggccatccagaagcgc
agcatggaagcttcggaatttctccagaacgccgtttacatcaacctccgccagctctcg
gaggaggagcggatccagcgctacagcatcctctccgagctctacgagttgatcggcttc
caccgcaagtccgccttcttcaagcgcgtggctgccatgcagtgcgtggcccccagcatc
gcggagccgggctggagggcctgctacaagctcctcctggagacacttcctggctacagt
ctgtccctggatccgcaagacttcaacaaaggcacgcaccgaggctgggccgccgtccag
atgcgtctccttcacgagttggtctacgcgtcccggagaatggggaaccccgccctctcg
gtcaggcacctgtccttcctgttacagaccatgctggacttcttgtcagatcaagaaaag
aaggacgtgacgcagagcctggagaactacacgtccaagtgccccggcaccatggagcgc
atcacgctccccgacggcctcacgctgcccccgtggcccntcaccaagctccccatcgtc
aggtgtgtgaagctgctgagcctgcccgccagcctccggccgcagaagatgaagagcctg
ctgggccagagcgtgtcggccaagagccccttcatctactccccgatcaccgtgcacagc
cgaggggaggagaggagcgggaaaatcgatttccagtgggtgcaaggagatgtgtgtgaa
gttcagctgatggtgtataacccgatgccgtttgaactgcgggttgaaaacatggggctg
ctgaccagtggtgtggagttcgagtctctccccgcagcgctgtcccttcccgctgagtct
ggtctttacccggtgacgcttgttggggtcccacagacgacggggacaatcactgtgaat
ggttaccacaccacggtctttggcgtcttcagtgactgttttctggacaacctcccggga
gtcaagaccggcggctccacggtggaagtcattcctgctctgcccaggctgcagatcagc
acctctctgcccagatctgcgcattcactgcagccgtcctctggtgacgaagtatctacg
aatgtgtccgtccagctttacaacggagaaacgcagcacctggtcgtgaaactggaaaac
attggaatggaacccctggagaaactggaagtcacctcaaaaattctcaccaccaaagag
aaattgtatggtgacttcctgagctggcggctggaagaaactcttgcccagtttcctctg
cagcctggaaaggtggccacgttgaccgtctgcatcaaagtgaagctggatttctcctgc
caggagaacctcctccaggacctgagtgacgatggcatcagcgtgagcggcttcccgctg
tgcagcccctcgcgccaggtcgtgaggcctcgggcggacagcaagcccgcgaacccagct
gagggcagccggcctggggaccccggccacgtgaagaccctggaagcaatcctgaatttc
aaatactccggaggccccggccacgtggaaggatattacaggagcctcgccctggggctg
cacgtggaggtggagccctctgtgttcttcacgcgcgtcagcacgctgcccgccaccagt
acccggcagtgccacctgctcctggacgtcttcaactccacggagcacgagctgacggtc
agtgcccggagcaatgaagagctcattctgcacgcgggcgagtgccagcgaatggctatt
caagtggacaagttcaactttgagagcttcccagagtcccctgaggagaaggggcagtcg
gcaaattccaagcagctggaggaggagcggcaagaagcccgaggcctggagatcaacagc
aagctcggcatccgctggaccatcccctctctgaagcgcacaggcgaggcgagcgtggaa
ggtctcctgaaccagctggtcctgggacacctgcagctggctcctctgctgtgggatgtg
ctggtggacggacagccctgtgaccacgaggcggcggcctgccgggtgggcgaccccgtg
cgcctggaggtgcggctgaccaaccggagcccacgcagcgtggggcccttcgccctcagc
gtggtgcccttccaggaccaccagaacggcgtgcacaactacgacctgcaccacgccgtc
tccttcgtgggctccggcaccttctatctggacaaggtgccaccgtcgggccaggcagcc
tgccttggggccctgctcttcctctacacgggcgacttcttcctccacgtccgcttccat
gaggacagctccagcaaggagctgccgccctcctggttctgcctgcccagcgtgcacgtg
cgcgccctggaggcgcaggcctag
DBGET
integrated database retrieval system
