Sus scrofa (pig): 100152140
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Entry
100152140 CDS
T01009
Symbol
SLC44A1
Name
(RefSeq) choline transporter-like protein 1 isoform X2
KO
K06515
solute carrier family 44 (choline transporter-like protein), member 1
Organism
ssc
Sus scrofa (pig)
Pathway
ssc05231
Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09160 Human Diseases
09161 Cancer: overview
05231 Choline metabolism in cancer
100152140 (SLC44A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssc02000
]
100152140 (SLC44A1)
04090 CD molecules [BR:
ssc04090
]
100152140 (SLC44A1)
Transporters [BR:
ssc02000
]
Solute carrier family (SLC)
SLC44: Choline-like transporter
100152140 (SLC44A1)
CD molecules [BR:
ssc04090
]
Proteins
100152140 (SLC44A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Choline_transpo
Motif
Other DBs
NCBI-GeneID:
100152140
NCBI-ProteinID:
XP_003480615
Ensembl:
ENSSSCG00000005425
Vega:
OTTSUSG00000002425
UniProt:
A0A4X1VDR5
K7GL05
LinkDB
All DBs
Position
1:246548461..246760527
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AA seq
657 aa
AA seq
DB search
MGCCSSASSAAQSSKREWKPLEDRSCTDIPWLLLFILFCIGMGFICGFSVATGAAARLVS
GYDSYGNICGQKNAKLEAIPNSGMDHTHRKYVFFLDPCNLDLINRKIKSVALCVAACPRQ
ELKTLSDVQKFAEINGSALCSYSLKPSEYTTSSKAPVLCPKLPVPASAPIPFFHRCAPVN
ISCYAKFAEALITFVSDNSVLHRLISGVMTSKEIILGLCLLSLVLSMILMVIIRYISRIL
VWILTILVILGSLGGTGVLWWLYAKQRKSPKEAVIPEQLQIAEDNLRALLIYAIAATVFT
VILFLIMLVMRKRVALTIALFHVAGKVFIHLPLLVFQPFWTFFALVLFWVYWIMTLLFLG
TTGSAVQNDQGFVEFRVSGPLQYMWWYHVVGLIWISEFILACQQMTVAGAVVTYYFTRDK
RNLPFAPILASVNRLIRYHLGTVAKGSFIITLVKIPRMILMYIHSQLKGKENACARCVLK
SCICCLWCLEKCLNYLNQNAYTATAINSTNFCTSAKDAFVILVENALRVAAINTVGDFML
FLGKVLIVCSTGLAGIMLLNYQQDYTVWVLPLIIVCLFAFLVAHCFLSIYEMVVDVLFLC
FAIDTKYNDGSPGREFYMDKVLMEFVENSRKAMKEAGKGGVADARELKPMASGASSA
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgggctgctgcagctccgcctcctcagccgcgcagagctccaaacgagaatggaagcca
ctggaggaccgtagctgcacagacataccttggctgctgctttttatcctcttctgcatt
gggatgggatttatttgtggcttttcagtagcaacaggtgcagctgcaagactagtgtca
ggatacgacagctatggaaatatctgtgggcagaaaaatgcaaagttggaagcaatacca
aacagtggcatggaccacacccatcggaagtatgtattctttttggatccatgcaatctg
gacttgataaaccggaagatcaagtctgtagcactgtgtgtagcagcatgtccaagacaa
gaactgaaaaccctaagtgatgttcagaagtttgccgagataaatggctctgcactgtgc
agctacagcctaaagccttctgaatacaccacgtcttcaaaagctcctgttctttgcccc
aagctacctgttccagcgagtgcacctattccattcttccatcgctgtgctcctgtgaac
atttcctgctatgccaagtttgcagaggccctgatcacctttgtcagtgacaatagtgtc
ttacacaggctgattagtggagtaatgaccagcaaagaaattatattgggactttgcttg
ttgtcactagttctatccatgattttgatggtgataatcaggtacatatcgagaatactt
gtgtggatcttaacaattctggtcatcctcggttcacttggtggcacaggtgtactatgg
tggctatatgcaaaacagagaaagtctcccaaagaggcagtgattcctgaacagcttcag
atagctgaagacaatcttcgagccctccttatctatgccattgcagctacagtgttcaca
gttatcttgttcctcatcatgctggttatgcgcaaacgggttgctctcaccatcgccttg
ttccacgtggccggcaaggtcttcattcacttgccactgctagtcttccaacccttttgg
actttctttgctcttgtcctgttttgggtgtactggatcatgacgcttctttttcttggc
actaccggcagcgctgttcagaacgaccaaggctttgtggagttcagagtttctgggcct
ctgcagtacatgtggtggtaccatgtggtgggcctgatttggatcagtgaatttattcta
gcatgtcagcagatgacggtggcgggagctgtggtaacatactattttactagggataaa
aggaatttgccatttgcacctattttggcatcagtgaatcgccttattcgttaccacctt
ggtactgtggcaaaaggatctttcattatcacattagtcaaaattccacgaatgatcctt
atgtatattcacagtcagctcaaaggaaaggaaaatgcttgtgctcgttgtgtgctgaaa
tcttgcatttgttgcctttggtgtcttgaaaagtgcctaaattatttaaatcagaatgca
tacacagccacagctatcaacagcaccaacttctgcacttcagcgaaggatgcctttgtc
attctcgtggagaatgctttgcgagtggctgccatcaacacagtgggggatttcatgtta
ttcctaggcaaggtgctgatagtctgcagcacaggtttggctgggataatgctgctcaac
taccagcaagattacacagtatgggtgctgcctctgatcatcgtctgcctctttgctttc
ctagtcgctcattgcttcctgtccatttatgaaatggtagtggatgtattattcttgtgt
tttgccattgatacaaaatacaatgatggaagcccaggcagagaattttatatggataaa
gtgctgatggagtttgtggaaaacagtaggaaagcaatgaaagaagctggtaagggaggc
gtagctgatgcccgagagctaaaaccgatggcttcgggagcaagttctgcttga
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