Sus scrofa (pig): 100152210
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Entry
100152210 CDS
T01009
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100152210 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssc03021
]
100152210 (TAF5)
03036 Chromosome and associated proteins [BR:
ssc03036
]
100152210 (TAF5)
Transcription machinery [BR:
ssc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100152210 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
100152210 (TAF5)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
100152210 (TAF5)
STAGA complex
100152210 (TAF5)
TFTC complex
100152210 (TAF5)
SAGA complex
100152210 (TAF5)
SLIK complex
100152210 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_Nup120_160
PEP5_VPS11_N
RAB3GAP2_N
CDK5RAP3
Beta-prop_RIG_1st
Late_protein_L2
eIF2A
Cytochrom_D1
VPS8_N
ABM-like
PROPPIN
Motif
Other DBs
NCBI-GeneID:
100152210
NCBI-ProteinID:
XP_020929143
UniProt:
F1S845
A0A8D0VIQ3
LinkDB
All DBs
Position
14:114304563..114321624
Genome browser
AA seq
800 aa
AA seq
DB search
MAALAEEQTEVAVKLEPEGPPTLLPPQAGDGAGEGGGGATNNGPNGGGGNVAASSSAGGD
GGTPKPSVAVSAVAPAGVAPVAAAAPEAGGPHDRQTLLAVLQFLRQNNLREAEEALRREA
RLLEEAVAGSGAPGEADGAGAETASALLSRVTSSGPGPAAPEPPGSAASGASAVSGLATG
PAAPGKVGSLAVEDQPDVSAVLSAYNQQGDPTMYEEYYSGLKHFIECSLDCHRAELSQLF
YPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDF
RTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLA
GEAKREANKSKVFFGLLKEPEIEVPLDDEDEEGENEEGKPKKKKPKKDNIGSKSKKQDPN
APPQNRIPLPELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTD
DSSLIAGGFADSTVRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILY
GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYF
VSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGN
CVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS
RDGEILASGSMDNTVRLWDAVKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTPV
VHLHFTRRNLVLAAGAYSPQ
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctggcggaggagcagacggaggtggcggtcaagttagagcctgaaggaccg
ccgacgctgctacctccgcaggcgggggacggcgctggcgagggtggcggtggcgcaacc
aacaacggccccaatggcggtggcgggaacgttgcggcatcgtcgtcggccggcggggat
ggtggaactcctaagccctcggtggctgtgtccgccgttgccccggcgggggtggctccg
gtggccgccgctgctccggaggctggcgggccccacgaccgacagactctgctggctgta
ctgcagtttctacggcagaacaacctccgtgaggccgaagaggcgctgcgccgtgaggcc
cgtctgctagaggaggcagtggcgggctccggagccccgggagaggcggacggcgccggc
gctgagacggctagcgcgcttctcagccgggtcacttcctcgggccccggccctgcggcc
ccagagcctcccggcagcgccgcttcgggagcctctgctgtctcgggcttagcgacaggt
cctgcggctccggggaaagttggaagtctagctgtggaagaccagccggatgtcagtgct
gtgctgtcagcctacaaccaacaaggagaccccacaatgtatgaagaatactatagtgga
ctgaaacacttcattgaatgttccctggactgccatcgggcagagttatctcaactcttt
tatcccctatttgtacacatgtacttggaactagtctacaatcaacatgagaatgaagca
aaatcattctttgagaagttccatggagatcaggaatgttattaccaggatgacctacga
gtattatctagtcttaccaaaaaggaacacatgaaagggaatgagaccatgttggatttt
cgaacaagtaaatttgttctgcgtatttcccgtgactcgtaccaactcttgaagaggcat
cttcaggagaaacagaacaatcagatatggaacatagttcaggagcacctctacattgac
atctttgatgggatgccgcgtagtaagcagcagatagatgcgatggtgggaagtttggca
ggagaggctaaacgagaggcaaacaaatcaaaggtattttttggtttattaaaagagcca
gaaattgaagtgcctttggatgatgaggatgaagaaggagaaaatgaagaaggaaagcct
aaaaagaagaagcctaaaaaagacaatattggatctaaaagcaaaaaacaagatcccaat
gctccacctcagaatagaattcctcttcctgagttgaaagattcggataaattggataag
ataatgaatatgaaagaaaccaccaaacgagtgcgccttggaccagattgtttaccctcc
atttgcttctatacattcctcaatgcttaccagggcctcactgcagtggatgtcactgat
gactctagtttgattgctggaggttttgcagattcaactgttagagtgtggtctgtgaca
cccaaaaagcttcgtagtgtcaaacaagcagcagatcttagcctgatagataaagaatct
gatgatgtcttagaaagaatcatggatgagaaaacagcaagtgagttgaagattttgtat
ggtcacagcgggcctgtctatggagccagcttcagtccggatagaaactacctgctttcc
tcttcagaggatggaactgtgagattgtggagtcttcaaacgtttacttgcttggtggga
tataaaggacacaactatccagtgtgggacacacagttttctccatatggatattatttt
gtgtcggggggccatgatcgagtagctcggctctgggctacggatcactatcagccttta
aggatatttgctggtcatcttgctgatgtgaactgtaccagattccatccaaattctaat
tatgttgctacgggctctgcagatagaaccgtgaggctctgggatgtcctgaatgggaac
tgtgtaaggatcttcactggacacaagggaccaattcattccttgacattttctcccaat
gggagattcctggctacaggagcaacagatggcagagtactcctttgggacattggacat
ggtttgatggttggagaattaaaaggccacaccgatacagtctgttcacttagatttagt
agagatggtgaaattttggcatcaggttcaatggataatacagtacggttatgggatgct
gtcaaagcatttgaagatttagagactgatgactttactacagccactggccatataaat
ttacctgagaattcacaggagttattgttgggaacatatatgaccaaatcaacacccgtt
gtacacctccattttactcgaagaaacttggttctagctgcaggagcttatagtccacaa
taa
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integrated database retrieval system
