KEGG   Sus scrofa (pig): 100152210
Entry
100152210         CDS       T01009                                 
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    100152210 (TAF5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ssc03021]
    100152210 (TAF5)
   03036 Chromosome and associated proteins [BR:ssc03036]
    100152210 (TAF5)
Transcription machinery [BR:ssc03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     100152210 (TAF5)
   Coactivators
    SAGA/TFTC/STAGA complex
     100152210 (TAF5)
Chromosome and associated proteins [BR:ssc03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     100152210 (TAF5)
    STAGA complex
     100152210 (TAF5)
    TFTC complex
     100152210 (TAF5)
    SAGA complex
     100152210 (TAF5)
    SLIK complex
     100152210 (TAF5)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_IFT122_1st Beta-prop_THOC3 WD40_Prp19 TFIID_NTD2 WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML WDR55 Beta-prop_WDR36-Utp21_1st NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_VPS8 Beta-prop_WDR75_1st DSE1_N ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_Aladin WDR90_beta-prop_4th PAC11 Beta-prop_RIG_2nd Beta-prop_Vps41 Beta-prop_IFT140_1st CFAP251_N Beta-prop_WDR41 Beta-prop_EIPR1 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_NOL10_N ASA1 WD_LRWD1 Tricorn_2nd Beta-prop_DCAF12 RAB3GAP2_N CDK5RAP3 Beta-prop_RIG_1st Late_protein_L2 eIF2A LisH_PAC1 Cytochrom_D1 Beta-prop_ACSF4 ABM-like PROPPIN
Other DBs
NCBI-GeneID: 100152210
NCBI-ProteinID: XP_020929143
UniProt: F1S845 A0A8D0VIQ3
LinkDB
Position
14:114304563..114321624
AA seq 800 aa
MAALAEEQTEVAVKLEPEGPPTLLPPQAGDGAGEGGGGATNNGPNGGGGNVAASSSAGGD
GGTPKPSVAVSAVAPAGVAPVAAAAPEAGGPHDRQTLLAVLQFLRQNNLREAEEALRREA
RLLEEAVAGSGAPGEADGAGAETASALLSRVTSSGPGPAAPEPPGSAASGASAVSGLATG
PAAPGKVGSLAVEDQPDVSAVLSAYNQQGDPTMYEEYYSGLKHFIECSLDCHRAELSQLF
YPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDF
RTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLA
GEAKREANKSKVFFGLLKEPEIEVPLDDEDEEGENEEGKPKKKKPKKDNIGSKSKKQDPN
APPQNRIPLPELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTD
DSSLIAGGFADSTVRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILY
GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYF
VSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGN
CVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS
RDGEILASGSMDNTVRLWDAVKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTPV
VHLHFTRRNLVLAAGAYSPQ
NT seq 2403 nt   +upstreamnt  +downstreamnt
atggcggcgctggcggaggagcagacggaggtggcggtcaagttagagcctgaaggaccg
ccgacgctgctacctccgcaggcgggggacggcgctggcgagggtggcggtggcgcaacc
aacaacggccccaatggcggtggcgggaacgttgcggcatcgtcgtcggccggcggggat
ggtggaactcctaagccctcggtggctgtgtccgccgttgccccggcgggggtggctccg
gtggccgccgctgctccggaggctggcgggccccacgaccgacagactctgctggctgta
ctgcagtttctacggcagaacaacctccgtgaggccgaagaggcgctgcgccgtgaggcc
cgtctgctagaggaggcagtggcgggctccggagccccgggagaggcggacggcgccggc
gctgagacggctagcgcgcttctcagccgggtcacttcctcgggccccggccctgcggcc
ccagagcctcccggcagcgccgcttcgggagcctctgctgtctcgggcttagcgacaggt
cctgcggctccggggaaagttggaagtctagctgtggaagaccagccggatgtcagtgct
gtgctgtcagcctacaaccaacaaggagaccccacaatgtatgaagaatactatagtgga
ctgaaacacttcattgaatgttccctggactgccatcgggcagagttatctcaactcttt
tatcccctatttgtacacatgtacttggaactagtctacaatcaacatgagaatgaagca
aaatcattctttgagaagttccatggagatcaggaatgttattaccaggatgacctacga
gtattatctagtcttaccaaaaaggaacacatgaaagggaatgagaccatgttggatttt
cgaacaagtaaatttgttctgcgtatttcccgtgactcgtaccaactcttgaagaggcat
cttcaggagaaacagaacaatcagatatggaacatagttcaggagcacctctacattgac
atctttgatgggatgccgcgtagtaagcagcagatagatgcgatggtgggaagtttggca
ggagaggctaaacgagaggcaaacaaatcaaaggtattttttggtttattaaaagagcca
gaaattgaagtgcctttggatgatgaggatgaagaaggagaaaatgaagaaggaaagcct
aaaaagaagaagcctaaaaaagacaatattggatctaaaagcaaaaaacaagatcccaat
gctccacctcagaatagaattcctcttcctgagttgaaagattcggataaattggataag
ataatgaatatgaaagaaaccaccaaacgagtgcgccttggaccagattgtttaccctcc
atttgcttctatacattcctcaatgcttaccagggcctcactgcagtggatgtcactgat
gactctagtttgattgctggaggttttgcagattcaactgttagagtgtggtctgtgaca
cccaaaaagcttcgtagtgtcaaacaagcagcagatcttagcctgatagataaagaatct
gatgatgtcttagaaagaatcatggatgagaaaacagcaagtgagttgaagattttgtat
ggtcacagcgggcctgtctatggagccagcttcagtccggatagaaactacctgctttcc
tcttcagaggatggaactgtgagattgtggagtcttcaaacgtttacttgcttggtggga
tataaaggacacaactatccagtgtgggacacacagttttctccatatggatattatttt
gtgtcggggggccatgatcgagtagctcggctctgggctacggatcactatcagccttta
aggatatttgctggtcatcttgctgatgtgaactgtaccagattccatccaaattctaat
tatgttgctacgggctctgcagatagaaccgtgaggctctgggatgtcctgaatgggaac
tgtgtaaggatcttcactggacacaagggaccaattcattccttgacattttctcccaat
gggagattcctggctacaggagcaacagatggcagagtactcctttgggacattggacat
ggtttgatggttggagaattaaaaggccacaccgatacagtctgttcacttagatttagt
agagatggtgaaattttggcatcaggttcaatggataatacagtacggttatgggatgct
gtcaaagcatttgaagatttagagactgatgactttactacagccactggccatataaat
ttacctgagaattcacaggagttattgttgggaacatatatgaccaaatcaacacccgtt
gtacacctccattttactcgaagaaacttggttctagctgcaggagcttatagtccacaa
taa

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