Sus scrofa (pig): 100152361
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Entry
100152361 CDS
T01009
Symbol
SMC4
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X2
KO
K06675
structural maintenance of chromosome 4
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssc03036
]
100152361 (SMC4)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
100152361 (SMC4)
Condensin II
100152361 (SMC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
ABC_tran
ATG17_like
Motif
Other DBs
NCBI-GeneID:
100152361
NCBI-ProteinID:
XP_005670009
Ensembl:
ENSSSCG00000011731
UniProt:
A0A4X1VG91
A0A8D1A0H0
LinkDB
All DBs
Position
13:100078149..100120907
Genome browser
AA seq
1288 aa
AA seq
DB search
MPRKGTQPSTARRREEGPPQSPDRTSSDAQPESPPGCSESRAPATAETPSEEIDNRSLEE
ILSSIPPPPPPAMTNEAGAPRLMITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKS
NVIDSMLFVFGYRAQKIRSKKLSVLIHNSDEHKDIQSCTVEVHFQKIIDKEGNDYEVVPN
SNFYVSRTAYRDNTSVYHISGKKKTFKDVGNLLRSHGIDLDHNRFLILQGEVEQIAMMKP
KGQTEHDEGMLEYLEDIIGSGRLNEPIKVLCRRVEILNEHRGEKLNRVKMVEKEKDALEG
EKNIAIEFLTLENEIFRKKNHVCQYYIYDLQKRIAEMETQKEKIHEDTKEINEKSNILSN
EMKAKNKAVKDVEKKLNKITKFIEENKEKFTKLDLEDVQVREKLKHATSKAKKLEKQLQK
DKEKVEEFKSIPAKSENIITETTTRNNALEKEKEKEEKKLKEVMDSLKQETQGLQKEKES
QEKELMGFSKSVNEARSKMDVAQSELDIYLSRYNTAVSQLSKAKDALMAASETLKERKAA
IGDIEAKLPQTECELKEKEKELQKLTQEEINFKSLVRDLFQKVEEAKSSLAMNRSRGKVL
DAIIQEKKTGRIPGIYGRLGDLGAIDEKYDVAISSCCHALDYIVVDSIDTAQECVNFLKR
QNIGVATFIGLDKMAVWAKKMTQIQTPENTPRLFDLVKVKDEKIRQAFYFALRDTLVADN
LDQATRVAYQKDRRWRVVTLQGQIIEQSGTMTGGGSKVMKGRMGSSVVVEISEEEVNKME
SQLQRDSQKAVQIQEHKVQLEETVVKLRHSEREMRNTLEKFTASIQRLSEQEEYLRVQVK
ELEANVLATAPDQKKQKLLEENVNAFKAEYDSVAEKAGKVEAEVKRLHNIIVEINNHKLK
AQQDKLDKINKQLDECASAITKAQVAIKTADRNLKKAQDSVFRTEKEIKDTEKEVDDLTT
ELKSLEDKAAEVIKNTNAAEESLPEIQKEHRSLLQELKVIQENEHALQKDALSIKLKLEQ
IDGHIGEHNSKIKYWQKEISKISLHPIEDNPVEEIAVLTPEDLEAIKNPDSITNQIALLE
AQCHEMKPNLGAIVEYKKKEELYLQRVAELDKITYERDNFRQAYEDLRKQRLNEFMAGFY
IITNKLKENYQMLTLGGDAELELVDSLDPFAEGIMFSVRPPKKSWKKIFNLSGGEKTLSS
LALVFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEISD
RLIGIYKTYNITKSVAVNPKEIASKGLC
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtaagggcacccagccctccactgcccggcgcagagaggaagggccgccgcag
tccccggaccgcaccagcagcgatgcgcagccggagtcgccgcccggctgctcggagagc
cgggcgcctgccaccgcagagactccaagtgaggaaattgataatagaagtttagaagag
attttgagtagcatccctccgccgccgcctccagcaatgaccaatgaagctggagctcct
cggcttatgataactcatattgtaaaccagaacttcaaatcctatgctggggaaaaaatt
ctaggaccttttcataagcgcttttcctgtattattggtccaaatggcagtggcaaatcc
aatgttattgattcaatgctttttgtgtttggctatagagcacaaaaaatcagatctaaa
aaactctcagtactaatacacaattctgatgaacacaaggatattcagagttgtactgta
gaagttcattttcaaaagataattgataaggaagggaatgattatgaagttgttcctaac
agtaacttctatgtatccagaacagcctatagagataatacttctgtttatcacataagt
gggaagaagaagacatttaaggatgttggaaatcttcttcgaagccatggaattgacttg
gaccataatagatttttaatcttgcagggtgaagttgagcagattgctatgatgaaacca
aaaggccagactgaacatgatgagggtatgcttgaatatttagaagatataattggttct
ggacgactaaatgaacctattaaagtcttgtgtcggagagttgaaatattaaatgaacac
agaggagagaagttaaacagagtcaagatggtagaaaaggaaaaggatgccttagaagga
gaaaaaaacatagccattgaatttcttaccttggaaaatgaaatatttagaaaaaagaat
catgtgtgtcagtattatatttatgatctgcagaaacgaattgctgaaatggaaactcaa
aaggaaaaaattcatgaagataccaaagaaattaatgaaaagagcaatatactctcaaat
gaaatgaaagctaagaataaagctgtaaaagatgtagagaagaaactgaataaaatcaca
aaatttattgaggagaacaaagaaaaatttacaaagctagacttggaagatgttcaagtt
agggaaaaactaaaacatgctacaagtaaagccaaaaaactggagaaacaacttcaaaaa
gataaagaaaaggttgaagaatttaaaagtatacctgcaaagagtgagaatatcataact
gagacaacaactaggaacaatgcccttgagaaggaaaaagaaaaagaagagaaaaaatta
aaggaagttatggatagccttaaacaggaaacacaaggacttcagaaagaaaaagaaagt
caagagaaagaacttatgggattcagcaaatcagtaaatgaagcacgttcaaagatggat
gtagcccaatcagaacttgatatctatcttagtcgttataacactgcagtatctcaatta
agtaaagccaaggatgctctgatggcagcttctgagactctcaaagaaaggaaagctgca
attggagatatagaggcaaaactccctcaaaccgagtgtgaactaaaagagaaagagaaa
gaacttcagaaacttacacaggaagaaattaatttcaaaagtttggttcgtgatcttttc
caaaaagttgaagaagcaaagagttccttagcaatgaatcgaagtagggggaaagtcctt
gatgcaataattcaagaaaaaaaaactggcaggattccaggaatatatggaagattgggg
gacttaggagcaattgatgaaaaatatgatgttgccatttcatcctgttgtcatgcatta
gactacattgttgttgattctattgatacagcccaagaatgtgtaaacttcctaaaaaga
caaaatattggagttgcaacctttataggtttggataagatggcagtgtgggcaaagaaa
atgacccaaattcaaactcctgaaaatacacctcgtctatttgatttagtaaaagtgaaa
gatgagaaaattcgccaagctttttactttgctttacgggataccttagtagctgacaac
ttagatcaagccacaagagtagcatatcaaaaagatagaagatggagagtggtaacatta
caggggcagatcatagaacagtcaggtacaatgactggtggtggaagcaaagttatgaaa
ggaaggatgggttcatcagttgttgttgaaatctcagaagaagaggtaaataaaatggaa
tcacagttacagagagactctcaaaaagcagtgcaaatccaggaacacaaagtacaactg
gaagaaacagtagttaagttaaggcatagtgaacgagaaatgaggaatacactagaaaag
tttactgcaagcatccagcgtttatcagagcaagaagaatatttgcgtgtccaagttaag
gaactcgaagctaatgtacttgctacagccccagaccaaaaaaagcagaaattgctggaa
gaaaatgttaatgctttcaaagcagaatatgacagtgtggctgagaaagctggtaaagtt
gaagctgaggttaagaggttacacaacatcattgtagaaatcaataaccataaactcaag
gcccaacaagacaaacttgataaaataaataagcagttagatgaatgtgcttctgctatt
actaaagcccaagtagcaatcaagactgctgacagaaatctcaaaaaagcacaagactct
gtctttcgcacagagaaagaaataaaagatactgagaaagaagtagatgacttaacgaca
gagctaaaaagtcttgaggacaaagcagcagaagtcataaagaatacaaatgctgcagag
gagtccttacccgagatccagaaagaacatcgtagcctacttcaagaattaaaagtaatt
caagaaaatgaacatgctcttcaaaaagatgcacttagtattaagttgaaacttgaacaa
atagatggtcacattggtgaacataattctaaaataaaatattggcaaaaagagatttca
aaaatatcattgcatcccatagaagataatcctgttgaagagattgcagttctaactcca
gaggatcttgaagcaatcaagaacccagattctataacaaatcaaattgcacttttggaa
gcccagtgtcatgaaatgaaaccaaaccttggtgccattgtagagtataaaaagaaggaa
gagttatatttacaacgggtagcagaattggacaaaattacttatgaaagagataatttt
agacaggcgtatgaagatcttcggaaacaaaggcttaatgaattcatggcaggtttttat
ataataacaaataaattaaaggaaaattaccagatgcttactttgggaggcgatgctgaa
ctggagcttgtagacagcttggatccttttgctgaaggaatcatgttcagtgttcgacca
cctaaaaaaagttggaagaagatcttcaacctttcaggaggagaaaaaacgcttagttca
ttggctttagtatttgctcttcaccactacaaacccactcccctgtacttcatggatgag
attgatgcagcccttgatttcaaaaatgtgtccattgttgcattttatatatatgaacaa
acaaaaaatgcccagttcataataatttcccttcgaaataatatgtttgaaatttcggat
agacttattggaatttacaagacatacaatataacaaaaagtgttgcagtaaacccaaaa
gaaattgcatctaaaggactttgttaa
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