Sus scrofa (pig): 100152396
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Entry
100152396 CDS
T01009
Symbol
NHLRC1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100152396 (NHLRC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssc04121
]
100152396 (NHLRC1)
Enzymes [BR:
ssc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100152396 (NHLRC1)
Ubiquitin system [BR:
ssc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100152396 (NHLRC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_3
Baculo_IE-1
zf-C3HC4
Prok-RING_4
Beta-prop_EML_2
RING_XB3-XBAT31
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
100152396
NCBI-ProteinID:
NP_001245231
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Position
7:complement(13816243..13817644)
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AA seq
395 aa
AA seq
DB search
MGAEASGSGLALRELMREAEISLLECKVCFERFGHRQQRRPRNLPCGHVVCLACVAALAH
PRTLALECPFCRRACRGCDTSDCLPVLHLLELLGSALRPAPAASRGAPSSPGTLTCHYAF
GGWGTLVNPTGLALCPKTGRVVVVHDGKRRVKIFDSAGGCVHQFGEKGDAAQDIRYPLDV
TVTNDCHVVITDAGDRSIKVFDFFGQIKLVIGGQFSLPWGVETTPQNGVLVTDAEAGALH
LLEIDFPEGVLRKTERLQAHLHQPRGVAVSWLTGAIAVLEHPRARGTGTCSTTVKVLSAS
MQLIGQVDAFGLSLFFSSEITASAVTFDHQGNVIVADTSSQAVLCLGKPEEFPVLKPIIT
QGLSHPVALTFTKENSLLVLDSAAHSIKIYKVDWG
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgggtgccgaggcctccgggagcgggttggctctgcgggagctgatgcgcgaggcagag
atcagcctgctcgagtgcaaagtgtgctttgagcggtttggccaccgccagcagcggcgc
ccgcgcaacctgccctgcggccacgtggtctgcctggcctgcgtggctgctctggcgcat
ccgcggacgctggccctcgagtgccccttctgccggcgagcctgccggggctgcgacacc
agcgactgcctgcccgtgctgcacctcctggagctcctgggctccgcgcttcgcccggcg
cccgcggcctcccgcggcgccccctcctccccagggaccctcacctgccactacgccttc
ggcggctgggggaccttggtcaaccccacaggactggcgctgtgtcccaagacaggacgg
gtcgtggtggtgcacgacggcaagaggcgggtcaagatctttgactccgcgggaggatgt
gtccatcaatttggagagaagggggacgctgctcaggacattaggtacccacttgacgtc
actgtcaccaacgactgccatgtggttatcaccgacgccggcgaccgctccatcaaagtg
tttgacttttttggccagatcaagcttgttattggaggccagttctccttgccttggggt
gtggagaccacccctcagaatggggtcttggtaactgacgcagaggcaggggccctgcac
ctcctggaaatcgactttccggaaggagtccttcggaaaactgaacggttgcaagctcac
ctgcaccaacccaggggggtggccgtgtcctggctcacgggggccatcgcggtcctagag
cacccccgggctcggggaaccggaacctgcagcaccacggtgaaggtgctcagtgcaagt
atgcagctcatcggccaagtggatgcctttgggctgagcctctttttctcctccgaaata
actgcctcggctgtgacctttgatcaccagggaaatgtgattgttgctgatacttctagt
caggctgtcctatgcttaggaaaacccgaggagtttccagtcctgaagcccatcatcacc
cagggcctttcccatcctgtggcactgaccttcaccaaggaaaattctcttcttgtgctg
gacagtgcagcgcattctataaaaatctataaggttgactgggggtga
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