Sus scrofa (pig): 100152550
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Entry
100152550 CDS
T01009
Symbol
EFHC1
Name
(RefSeq) EF-hand domain-containing protein 1 isoform X1
KO
K23029
EF-hand domain-containing protein 1
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssc03037
]
100152550 (EFHC1)
04812 Cytoskeleton proteins [BR:
ssc04812
]
100152550 (EFHC1)
04990 Domain-containing proteins not elsewhere classified [BR:
ssc04990
]
100152550 (EFHC1)
Cilium and associated proteins [BR:
ssc03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
100152550 (EFHC1)
Cytoskeleton proteins [BR:
ssc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
100152550 (EFHC1)
Domain-containing proteins not elsewhere classified [BR:
ssc04990
]
EF-hand domain-containing proteins
Other EF-hand domain-containing proteins
100152550 (EFHC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DM10_dom
EF-hand_7
EF-hand_6
EF-hand_1
Motif
Other DBs
NCBI-GeneID:
100152550
NCBI-ProteinID:
XP_001928795
Ensembl:
ENSSSCG00000002620
UniProt:
A0A480I608
A0A8D2A5J1
Structure
PDB
PDBj
LinkDB
All DBs
Position
7:46244915..46320261
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AA seq
640 aa
AA seq
DB search
MVSHPVHGLPFLPGTSFKDSTKTAFHRSQTLGYRNGYAVVRRPTVGIGGDRLQVNQLSQA
ELDELANKAPVLTYGQLKRAPPAEFIPAHVAFDKKVLKFDAYFQEDVPGSTEEHYRIRQV
NIYYYLEDDSMSVIEPVVENSGIPQGKLIKRQRLPKNDRGDHYHWKDLNRGINITIYGRT
FRIVNCDKFTQVFLESQGIELNPPEKMALDPYTELRKQPLRKYVTPTDFDQLKQFLTFDK
QVLRFYAIWDDTDSMFGECRTYIIHYYLMDDTVEILEVHERNDGRDPFPLLMNRQRMPKV
LVENAKNFPQCVLEISDQEVLEWYTAKDFIVGKPLTMLGRTFFIYDCDPFTRQYYKEKFG
ISDLPRIDVSKKEPPPVKQELPPYNGYGLIEDSAQNCLALIPKAPKKDVIKMLMNDNKVL
RYLAALESPIPEDKGRRFVLSYFLATDMISIFEPPVRNSGIIGGKYLGRTKVVKPDSSME
NPIYYGPSDFFIGAVIEVFGHRFVILDSDDYVLKYMESNPAQFSPEALLSIQNHIRRRDT
PALELDSQRTEKDPGTQELEVLIDTIQKQLKDHPCRDSIREAFRIYDTEASGYVDRETFF
KICDSLHLPVDDSLIKELVRMCSHGDDKMDYSSFVRAFSH
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctcacccagtgcacggcctgccctttctcccgggcacgtcctttaaggactcc
acgaaaacagcatttcatagaagccagacgctgggctacaggaacggctatgcggtcgtt
cgccgtccaacagtcgggataggtggggaccggctccaggtcaaccagctgtcccaggct
gagctggacgagctggccaacaaggccccggtgctcacttacggccagctgaagcgggcc
ccgccggcagagttcattcctgcacacgtggcttttgacaaaaaggtgctgaaatttgat
gcctatttccaagaagatgttcccgggtcaactgaggagcattacaggatccgccaagtg
aatatttactactatctagaggatgatagcatgtctgtcatagagcctgtcgtggaaaac
tctgggatccctcaaggcaagttaatcaaacgccagcggctacccaagaacgaccgggga
gaccattaccattggaaggacctgaaccgaggaataaacatcaccatttatggcagaact
ttccgcattgtcaactgtgacaaattcacgcaggtatttctggaaagtcaagggattgaa
ttaaatccaccagagaagatggctcttgatccttacactgaactccggaagcagcctctt
cgtaagtatgtgactccaacggactttgatcaactgaagcagtttctcacctttgacaaa
caggtccttcgattctatgcaatctgggatgatacagacagcatgtttggtgaatgtcgg
acctacatcattcactattatctgatggacgacacagtggaaattctggaggtccacgaa
cggaatgacgggagagaccccttccccctcctgatgaaccgccagcgcatgcccaaggtt
ttggtggagaatgcaaagaacttccctcagtgtgtgctggaaatctctgatcaggaggtt
ctggaatggtacaccgccaaggacttcatcgtcggaaagccactcactatgctggggaga
accttcttcatttatgactgtgatccatttactcggcagtattacaaagagaagtttggc
atctccgatctaccacgcattgacgtgagcaagaaggagccgcctcctgtgaaacaggaa
ttgcctccctataatggttatggactcatcgaagactctgctcagaattgcttggctctc
attccaaaagctcccaaaaaagatgtcattaaaatgctgatgaatgacaacaaggtgctt
cgttatttggctgcactggaatcccccatcccggaagacaagggccgccggtttgtctta
tcttattttctagccactgacatgatcagtatctttgagcctcctgttcgaaattcgggg
atcattgggggcaagtacctcggcagaactaaagttgtcaagcccgactcctccatggaa
aaccccatctactatggccccagtgacttcttcattggtgccgtgattgaagtgtttggc
caccggtttgtcatcctcgattccgatgactatgttttgaaatacatggagagcaaccct
gcccagttttccccagaagctctcctgtcaattcagaaccacattcgaaggcgagacact
cctgcactggaactggacagccagcggacagaaaaggacccaggcacacaggaactagag
gtgctgattgacacgatccagaagcagctgaaagatcacccgtgcagggacagcatccgc
gaggcctttcggatttatgacacggaggcttcaggatacgtggacagggagacattcttt
aaaatctgcgactctctgcacctcccggtggatgattctctgattaaggagctcgtcagg
atgtgctcccacggagacgacaagatggactattccagctttgtccgcgctttctcccac
tga
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