Sus scrofa (pig): 100152607
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Entry
100152607 CDS
T01009
Symbol
LUM
Name
(RefSeq) lumican precursor
KO
K08122
lumican
Organism
ssc
Sus scrofa (pig)
Pathway
ssc05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
100152607 (LUM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ssc00535
]
100152607 (LUM)
Proteoglycans [BR:
ssc00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
100152607 (LUM)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRRNT
LRR_6
LRR_9
LRR_5
LRR_14
Motif
Other DBs
NCBI-GeneID:
100152607
NCBI-ProteinID:
NP_001230268
Ensembl:
ENSSSCG00000000916
UniProt:
F1SQ09
A0A8D0XMM8
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All DBs
Position
5:91748871..91756381
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AA seq
341 aa
AA seq
DB search
MHLGVFTLLLATIGSASGHYYDDDDYYFPLSIYGRSSPNCAPECNCPESYPTAMYCDELK
LKSVPMVPPGIKYLYLRNNQIDHIDDKAFENVTDLEWLILDHNLLENSKIKGRVFSKLKQ
LKKLHINYNNLTESVGPLPKSLVDLQLTNNKISKLGSFDGLVNLTFIHLQHNQLKEDAVS
AAFRGLKGLEYLDLSFNQMTKLPSGLPVSLLTLYLDNNKISNIPDEYFKHFSGLQYLRLS
HNELADSGIPGNSFNLSSLLELDLSYNKLKNIPTVNENLENYYLEVNELEKFEVKSFCKI
LGPLSYSKIKHLRLDGNRITQTSLPPDMYECLRVANEITVN
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgcatctaggcgtgtttactctcctcttggcgacaatcggcagcgccagtggccactac
tatgatgacgacgattattacttccccctctcgatttatgggcgatcatcgcccaactgt
gccccggaatgcaattgccctgagagctacccaacggccatgtactgcgatgagctgaaa
ttgaaaagcgtgccaatggtgcctcctggaatcaagtacctttacctgagaaacaaccag
atcgaccatatcgacgacaaggcctttgaaaatgtgactgatctagagtggctcattcta
gatcataaccttctagaaaactccaaaataaaaggaagagttttctctaaactgaagcaa
ctgaagaagctgcatataaattacaacaatctgaccgagtctgtaggcccactccccaaa
tccctggtggacctgcagctcactaataacaaaatctcgaagctcggctcctttgatgga
ctggtcaacctgacttttatccacctgcaacacaatcagctgaaagaggatgccgtttca
gcggcttttagaggtcttaaggggctcgaataccttgacttgagcttcaatcagatgacc
aaactgccttctggcctcccagtatctcttctaactctctacttagacaacaataagatc
agcaacatcccagatgagtatttcaagcatttcagtggcctgcagtacctgcgtttgtct
cataatgaactggctgatagtggaatacctggaaattcttttaatttatcatctctgctg
gagctggatctctcctacaataagcttaaaaacataccgactgtcaatgaaaaccttgaa
aactattacctggaggtcaatgaacttgaaaagtttgaagtaaagagcttctgtaagatc
ctgggaccattatcctactccaagatcaaacatttgcgtttggatggcaatcgcatcacc
caaactagtctaccacctgacatgtatgagtgtctacgcgtagcaaatgaaatcaccgtt
aattaa
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