Sus scrofa (pig): 100152808
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Entry
100152808 CDS
T01009
Symbol
WDHD1
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1 isoform X1
KO
K11274
chromosome transmission fidelity protein 4
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssc03036
]
100152808 (WDHD1)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
100152808 (WDHD1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Mcl1_mid
Beta-prop_IFT122_1st
Beta-prop_THOC3
Ctf4_C
Beta-prop_WDR5
HMG_WDHD1
Beta-prop_WDR3_1st
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
WDR55
ANAPC4_WD40
EIF3I
WD40_Gbeta
DSE1_N
Beta-prop_WDR3_2nd
Beta-prop_IFT140_1st
eIF2A
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
HMG_box
Beta-prop_WDR75_2nd
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_VPS8
Beta-prop_NOL10_N
Beta-prop_WDR75_1st
Beta-prop_Nup120_160
NrS1-1_pol-like_HBD
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
100152808
NCBI-ProteinID:
XP_020957924
Ensembl:
ENSSSCG00000005052
UniProt:
A0A8D1Z902
F1SSP1
LinkDB
All DBs
Position
1:complement(184300291..184378974)
Genome browser
AA seq
1129 aa
AA seq
DB search
MPATQKPMRYGHTEGHTDVCFDDSGSCIVTCGSDGDVRIWEDLDDDDPKSINVGEKAYSC
ALKNGKLVTAVSNNTIQVHTFPEGVPDGILTRFTTNANHVIFNEDGTKIAAGSSDFLVKV
VDVMDCSQQKTFRGHDAPVLSLSFDPKDIFLASSSCDGSVKVWQISDQTCAISWPLLQKC
NDVINAKSICRLAWQPKSGKLLAVPVEKSVKLYRRETWSNQFDLSDNFISQTLNIVTWSP
CGQYLAAGSINGLIIVWNVETKDCMERVKHEKGYAICGLSWHPTCGQIAYTDAEGNLGLL
ENVCDPNGKMSGSKVSSRVERDYNDLFDGDDTGNVGDFPNDNAVETHSFSKETRNDEEDD
DDLMLASGRPRQRSHILEDDENSVDVTMLKTGSSRLKEEEEDDQAGNIHSLPLITSQKPF
YDGPMPTPRQKPFQSGSTPLHLTHRFMVWNSIGIIRCYNDEQDNAIDVEFHDTSIHHATH
LSNTLNYTVADLSHEAILLACESTDELASKLHCLHFSSWDSSKEWIVDMPPNEDIEAVCL
GQGWAAAATSSLLLRLFTIGGVQKEVFSLPGPVVSMAGHGEQLIIVYHRGTGFDGDQCLG
IQLLQLGKKKKQILHGDPLPLTRKSYLVWLGFSAEGTPCYVDSEGIVRMLNRGLGYTWTP
ICNTREHCKGKSDHYWVVGIHENPQHLRCIPCKGSRFPPTLPRPAIAVLSFKLPYCQTGT
EKGQMEEQYWRSVLFHNHLDYLAKSGYEYEESTKNQAIKEQQELLMKMLALSCKLEREFR
CVELADLMTQNAVNLAIKYASRSRRLILAQKLSELAVEKAAELAAPQAEEEEEEEEDFRK
KLNAGYSNTPTEWSQPRLRNRVEEDTEDTEEVDDIEEKPEIHKHRQNPFFKSADSTDVPA
IKSGAVTSSSQGRINPFKVSGSSKEPANSFSSVRSTNILDNMNKSKKSALNRATNNEKSP
VIKPLVPKPKSKQASAASFFQKRTSQTDKTEEIKEENTKNSSSETPAVCPQNTENQRPKT
GFQMWLEENRSNILSDNPDFSDEADIIKEGMVRFRVLSAEERKAWAAKAKGGIASDGAEE
KKRKRVVDESHETENQEEKTKENLNLPKKQKPLNLSANQKLSAFAFKQE
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccacacagaagcctatgagatatggacacacagagggacacacagatgtctgt
tttgatgattctgggagctgtattgtaacttgtggaagcgatggtgatgtgaggatttgg
gaagacttggatgatgatgatcctaagtccattaatgttggagaaaaggcatattcatgt
gctttgaagaatgggaaactggtcactgcagtatctaacaatactattcaggtgcacaca
tttcctgaaggagttccagatggtatattaactcgctttactacaaatgcaaaccatgtg
atctttaatgaggacggtacaaaaattgctgctgggtctagtgattttctagtcaaagtt
gtggatgtgatggattgcagccaacagaaaacatttcgaggacatgatgcccctgtttta
agtctttcctttgaccctaaggacatctttctggcgtcatctagttgtgatggatctgtc
aaagtgtggcaaatttcagatcagacatgtgctattagttggccacttttacaaaaatgc
aacgatgtgataaatgcaaaatcaatctgcagacttgcttggcagccaaaaagtgggaag
ttattggcagttcctgtggaaaaatctgttaagctatatagaagagaaacttggagcaat
cagtttgatctttcagataatttcatctctcagacccttaatatagtaacctggtctcct
tgtggacagtatttagctgcagggagtattaatggtttaattatagtttggaatgtggaa
accaaagattgcatggaaagggttaaacatgagaaaggttatgcaatttgtggcctgtca
tggcatcctacttgtggtcaaatagcttatacggatgcagaaggaaatcttggactactg
gagaatgtttgtgatcctaatggaaagatgtcaggcagtaaggtatctagcagagtggaa
agggattacaatgatctttttgatggagatgatacaggaaatgttggtgattttccaaat
gacaatgcagtcgaaacccactctttttcaaaagaaactagaaatgatgaggaagatgat
gatgacctcatgctggcttcaggtcgtcctagacaacgaagtcacatcctagaagatgat
gagaactcagttgatgttacaatgctaaaaactggttctagtcgtctcaaggaggaggag
gaagatgatcaagcaggcaacattcacagtctaccacttataacatctcaaaagccgttt
tatgatggtcctatgccaactccccggcagaagccattccagtcaggttctacacccttg
catctcactcacagattcatggtgtggaattctattggaattattcgctgctataacgat
gagcaagacaatgccatagatgtggagttccatgatacctccatacaccatgcaacacac
ttatcaaacactttgaattatacagtagctgatctttcccatgaagctattttgttggca
tgtgagagcactgatgaactagcaagcaagcttcactgcctgcactttagttcttgggat
tcaagcaaagagtggattgtagacatgcctcccaatgaggatattgaagccgtatgtctt
ggtcagggatgggctgctgctgccaccagctccttgctccttcgcttgtttaccattgga
ggtgttcagaaagaggtcttcagtctccctggacctgtggtgtcaatggcaggacatgga
gaacagcttatcattgtttatcacagaggtacaggatttgatggggatcagtgccttgga
attcaactgctacagctgggaaaaaagaaaaaacaaatcttacatggtgatcctcttcct
cttacaaggaaatcctaccttgtatggcttggattttcagctgaaggtaccccatgttat
gtggattcagaaggcattgttcgaatgcttaacagaggacttggttatacatggactccc
atatgtaacacaagagaacactgcaaaggaaaatctgatcactactgggtggttggtatc
catgaaaatccccagcatctccggtgcattccttgcaaaggttctcgatttcctcccacc
cttccacgccctgctatagctgtgttatcctttaagcttccttactgccagactggtaca
gagaaagggcaaatggaggaacaatattggcgttcagttttgtttcacaatcatcttgat
tatttagctaaaagtggttatgaatatgaagagagtactaaaaatcaagcaataaaagaa
caacaggaacttttaatgaaaatgcttgcgctttcttgtaaactagagcgggaatttcga
tgtgtggaacttgcagatctaatgactcagaatgctgtgaatttagccattaaatatgct
tctcgttctcggagattaatattggcccaaaaacttagtgaactggctgtagagaaggca
gcagaattggcagcaccccaagctgaagaagaggaagaggaagaagaggatttcagaaaa
aagttgaatgctggttatagtaatactcctacagagtggagtcagccaaggctcagaaat
cgagttgaagaagatacagaggacactgaggaggttgatgatatagaagaaaaaccagaa
atacacaaacatagacagaacccattttttaaaagtgcagattccactgatgtgccagct
attaagtcaggtgcagttacctccagcagccaaggacgaataaaccccttcaaggtatca
ggcagttccaaagagccagccaattcattcagttcagtacgttcaactaatattttagac
aatatgaacaaatccaagaaatctgcacttaatcgagccacaaataatgaaaaatctcca
gttataaagcctttggttccaaagccaaagtctaagcaggcatcagcagcatcgtttttc
cagaaaagaacttcccaaactgataagactgaggaaataaaggaagaaaataccaagaat
tcatcatctgaaactcccgctgtatgtcctcaaaacactgaaaaccaaaggccaaagact
gggttccagatgtggctggaagaaaacagaagtaatattttgtcagacaatcctgacttt
tcagatgaagcagacataataaaagaaggaatggttcgatttagagtattgtcagctgaa
gaaaggaaggcttgggctgccaaggccaaaggaggaattgcaagtgatggagctgaagaa
aagaagcgaaaacgtgtggtcgatgaaagtcatgaaactgaaaaccaggaagaaaaaacg
aaggagaatctgaatttgcctaaaaagcaaaagcctttaaatctttctgcaaatcagaaa
ttgtcagcttttgcatttaagcaggaatag
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integrated database retrieval system
