Sus scrofa (pig): 100153051
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Entry
100153051 CDS
T01009
Symbol
TMF1
Name
(RefSeq) TATA element modulatory factor
KO
K20286
TATA element modulatory factor
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100153051 (TMF1)
Membrane trafficking [BR:
ssc04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
100153051 (TMF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
ATG16
SlyX
Vps27_GAT-like
Motif
Other DBs
NCBI-GeneID:
100153051
NCBI-ProteinID:
XP_020924859
Ensembl:
ENSSSCG00000011510
UniProt:
A0A480RLB4
LinkDB
All DBs
Position
13:complement(50442017..50477363)
Genome browser
AA seq
1093 aa
AA seq
DB search
MSWFNASQLSSFAKQALSQAQKSIDRVLDIQEEEPSAWAETIPYGEPGISPPVSGGWDTS
TWGLKSNTEPQSQPVASPKAITKPVRRTVVDESENFFSAFLSPNDVQTIQKSPVVSKPPA
KSQRPEEEVKSTLQESLDIEQSRTAETTESKVKDSAPCVQEETLAVGTLPPTAEGKHEET
VNKESDTKVSTVSLKVSESVINVKTTRENVSNVSTQPLTAETKDLALEPKEQKHEDRQSN
TPSPPVSTFSSGTSTTSDIEVLDHESVISESSASSRQETTDAKSSLHLMQTSFQLLSASA
CPEYNRLDDFQKLTESGCSSDAFERIDSFSVQSLDSRSVSEINSDDELSGKGYALAPIIL
NASTPKTKIVESVEGKSEEVKEALIMPTEETEMEESGRSATPVNCEQPDSLVSSTPINEG
HTVSDKVAELCEAPESQPEALSEKEDVCKTVEFLNEKLDKREAQLLSLSKEKALLEEAYD
NLKDEMFRVKEESSSISSLKDEFTQRIAEAEKKVQLACKERDAAKKEIKSMKEELATRLN
SSETSDLLKEKDEQIRGLMEEGEKLSKQQLHNSNIIKKLRAKDKENENIIAKLNKKVKEL
EEELQHLKQVLDGKEEVEKQHRDNIKKLNSVVERQEKDLGRLQLDMNELEEKNRSIQAAL
DSAYKELTDLHKANAAKDSEAQEAALSREMRAKEELSAALEKAQEEARQQQETLAIQVGD
LRLALQRAEQAAARKEDYLRHEISELQQRLQEAENRNQELSQSVSSTTRPLLRQIENLQA
TLGSQTSSWEKLEKNLSDRLGESQTLLAAAVERERAATEELLANKVQMSSMESQNSLLRQ
ENSRFQAQLESEKNRLRKLEDENNRYQVELENLKDEYVRTLEETRKEKTLLNSQLEIEKM
KVEQERKKAIFTQEAIKEKERKPFSVSSTPTMSRSSSISGVDMAGLQTSFLSQDEPHDHS
FGPMSVSANGSNLYDAVRMGAGSSIIENLQSQLKLKEGEITHLQLEIGNLEKTRSIMAEE
LVKLTNQNDELEEKVKEIPKLRTQLRDLDQRYNTILQMYGEKAEEAEELRLDLEDVKNMY
KTQIDELLRQRLS
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgagctggttcaatgcctcccagctgtccagcttcgccaagcaggccctgtctcaggcc
cagaagtccatcgacagggtcttggacatccaggaagaggagccgagcgcctgggccgag
accattccgtacggagagccgggaataagtcctcctgtcagtggaggatgggatacttca
acctgggggttaaaatcaaacactgaacctcagagtcaacctgtagcctctcctaaagca
attacaaagccagttcggagaactgtggtagatgagtctgaaaatttcttcagtgccttt
ctttctcccaacgatgtccagaccattcagaagagtcccgtggtatcaaaaccaccagct
aaatcacagcgaccagaagaagaagtgaaaagcaccttacaggagtccttggacattgaa
cagtcaagaacagctgaaacaactgagtcaaaagtaaaagattctgctccatgtgtacaa
gaggaaactctggcagtaggtactctgccacctacagctgaaggcaagcatgaagaaact
gttaataaggaatctgatacaaaggtgtcaactgtgagtttgaaagtatctgaaagtgta
attaatgtaaagacaactagggaaaatgtttcaaatgtatctacacagcctctcacagca
gaaacaaaggatttggccttggaacctaaggaacaaaaacatgaagacagacagagcaat
acaccttctcctcctgttagtaccttctcatcgggtacttctaccactagtgatattgaa
gttttagatcatgaaagtgtaataagtgagagctcagcaagttcgagacaagagactaca
gatgcaaaatcaagtctgcacttgatgcagacatcctttcagcttctctcagcatctgct
tgtcctgaatataatcgtttagatgatttccaaaaactcactgagagtggctgctcatct
gatgcttttgaaagaatagactcatttagtgtacagtcattagatagccgtagtgtaagc
gaaatcaattcagatgatgaactgtcaggcaagggatatgctttagcacctattatactt
aatgcttcaactccaaagactaaaatagttgaatctgttgaaggaaaatctgaagaagta
aaggaagcattaattatgcccactgaggaaacagaaatggaagaaagtggacgaagtgca
actcctgttaattgtgaacagccagatagcttggtttcttctacaccaataaatgaagga
catactgtctcagacaaggttgctgagttgtgtgaagctcctgaaagtcagccggaagca
ctttctgagaaggaagatgtatgcaagacagttgaatttctgaatgagaaactggataaa
agggaagctcagttattatctcttagtaaagaaaaagcacttctagaagaagcttatgat
aatctgaaagatgaaatgttcagagtgaaagaagaaagcagcagcatttcttccttgaaa
gatgagtttactcaaagaattgcagaagcagaaaagaaagttcagctagcctgcaaagag
agagatgctgctaaaaaggaaatcaaaagtatgaaagaagaacttgctactagattaaat
agtagtgaaacatcagaccttttgaaagagaaagatgagcagatccgagggttaatggaa
gaaggagaaaaactttcaaaacagcagctgcataattctaacatcattaagaaattaaga
gctaaagacaaagaaaatgaaaatattattgcaaagctgaacaaaaaagttaaagagcta
gaagaagagttacaacacttaaaacaggtccttgatggcaaagaagaggttgagaagcaa
cacagagacaatattaagaaacttaattctgtggtagaacgccaagagaaggatcttggc
cgacttcaattagacatgaatgaacttgaagaaaagaaccgaagtattcaggctgctctt
gacagtgcatataaggaacttactgatctccacaaagccaatgctgcaaaggatagtgaa
gcccaggaagctgctctgagtcgtgaaatgagagctaaagaagaactttctgcagcactg
gagaaggcccaagaagaagcccgtcagcagcaagaaacattagcaattcaagtgggtgac
cttaggctggcattgcaacgtgcggaacaagcagctgccagaaaagaggattatttgcgc
catgagatcagtgaactccagcagagactccaggaagcagagaatcgaaaccaagaactg
agtcaaagtgtttcatcaacaacaagaccattgcttcgacagatagaaaatttgcaagca
acactagggtcccagacgtcgtcatgggagaagttagagaagaatctttctgatagactt
ggtgaatcccagaccttgttggcagcagcagttgagagagaacgtgcagctacagaagaa
cttcttgccaacaaagttcaaatgtcttctatggagtcacagaattctctcttaagacaa
gaaaacagtagatttcaggcccagcttgaatcagagaaaaataggctaaggaaactagag
gatgaaaataataggtaccaagttgaattagaaaacctaaaagatgagtatgtaagaaca
cttgaagagacaaggaaagaaaagacactgttgaatagccagttagaaattgagaaaatg
aaagttgaacaagaaaggaagaaagcaattttcacccaagaagcaataaaagaaaaggaa
cggaagccattttctgtttctagtactcccacaatgtcacgctcaagttcaataagtgga
gttgatatggcagggctacagacgtcttttctctctcaggatgagcctcatgatcactca
tttggaccaatgtctgtatcagcaaatggaagcaatctttatgatgctgtaaggatggga
gcaggatcaagcattattgaaaatctacagtctcagctaaagctaaaggaaggagaaatt
actcatttacagctagaaattggcaatctagaaaaaacacgctcaataatggctgaagag
ctagttaaattaacaaatcaaaatgatgaacttgaagagaaagtgaaggagatacccaaa
cttcgaactcagctgagagatttggatcaaagatacaacactattctgcagatgtatgga
gaaaaagcagaagaggcagaagaacttcgattagatcttgaagatgtaaaaaatatgtat
aagactcaaatagatgaacttttaagacaaaggctcagttaa
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integrated database retrieval system