Sus scrofa (pig): 100153111
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Entry
100153111 CDS
T01009
Symbol
DDX21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssc03009
]
100153111 (DDX21)
03036 Chromosome and associated proteins [BR:
ssc03036
]
100153111 (DDX21)
Enzymes [BR:
ssc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100153111 (DDX21)
Ribosome biogenesis [BR:
ssc03009
]
Eukaryotic type
Pre-60S particles
Helicases
100153111 (DDX21)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
100153111 (DDX21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
Cas3-like_C_2
AAA_30
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
100153111
NCBI-ProteinID:
XP_005657444
Ensembl:
ENSSSCG00000010247
UniProt:
F1SUG7
A0A8D1LWS8
LinkDB
All DBs
Position
14:72039985..72063778
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AA seq
784 aa
AA seq
DB search
MPGKLRSDADLESETATAKVEMPRKQNEKKGRKEKPKSSKTEKAEEMEEVISPKAKKVKK
KAGPSEVDVDSPKSKKAKKKEEPPQDDIISPKTKSAKKSKEALEKEVVSPKTKKVIKNEE
PSVEEIDAPKPKKMKKEKEMNGGIGEKSANLKNGFSHSGLDSDSKEAATEESNSELEQEI
SVEQKEGAFSNFPISEETIKLLKARGVTFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFS
FAIPLIEKLQGELQDRKRGRAPQVLVLAPTRELASQVSRDFSDITKKLAVACFYGGTPYG
GQIDRMRNGIDILVGTPGRIKDHLQNNKLDLTKLKHVVLDEVDQMLDMGFADQVEEILCV
AYKKDSEDNPQTLLFSATCPHWVYNVAKKYMKSTYEQVDLIGKKTQKTAITVEHLAIKCH
WTQRAAVIGDVIRVYSGYQGRTIIFCETKKEAQELSQNAAVRQDAQSLHGDIPQKQREIT
LKGFRNGDFGVLVATNVAARGLDIPEVDLVVQSCPPKDVESYIHRSGRTGRAGRTGICIC
FYQHKEEYQLTLVEQKAGIKFKRIGVPSPTEIIKASSKDAIRLLDSVPPTAIGHFKQSAE
KLIEEKGAVEALAAALAHISGATSVDQRSLINSDAGFVTMILRCSIEMPNISYAWKELKE
QLGEDIDSKVKGMVFLKGKQGVCFDIPTAAVTEVQEKWHDSRRWQLSVATEQPELEGPRE
GYRSFRGQREGGRGFRGQQKGNRSFRGQREGNRNFRGQRSGGGSRSNRFQNKGQKRSFSK
AFGQ
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgccggggaaacttcgtagtgacgcggatttggagtcagaaaccgccacggcaaaagtg
gagatgccgcgaaagcaaaatgagaagaaaggtagaaaggagaagccaaaatctagtaag
actgaaaaggcagaagaaatggaagaagtgatttcccccaaagctaaaaaagttaaaaag
aaagcagggccttctgaagttgacgtggattctcctaaatccaaaaaggctaaaaagaaa
gaggagccacctcaagatgacattatttctcctaaaaccaaaagtgcgaaaaaatcaaag
gaggctttggaaaaggaagttgtttctcctaaaaccaaaaaagtaataaaaaatgaagag
ccttctgtggaagaaatagatgctcctaagcccaagaagatgaagaaagaaaaagaaatg
aatggaggaattggagagaaaagcgcaaacctgaagaatggattctctcattctggactt
gactctgactccaaggaagctgccactgaagagagcaacagtgagttagagcaggaaata
tctgtggagcaaaaagaaggagctttctctaattttcccatatctgaagaaacgattaaa
cttctcaaagcccgtggagtgaccttcctgtttcccatacaagcaaagacgtttcaccat
gtctatagcgggaaggacctgattgcacaggcacggacaggaactgggaagacattctcc
tttgccatccctttgattgagaaacttcagggagaactacaagaccggaagagaggccgt
gcccctcaggtactggttcttgcacccacgagggagttggcaagtcaagtaagcagagac
ttcagtgacatcacgaaaaagctggctgtggcttgtttttatggtggaactccctatgga
ggacagattgatcgcatgcggaatggaattgatatcttagttgggacaccaggtcgtatt
aaggaccacctgcagaataacaagctggatctcaccaaacttaagcatgttgtcctggat
gaagttgaccagatgttggacatgggctttgctgatcaagtggaagagattttatgtgtg
gcatacaagaaagattcagaagacaatccccaaaccttgcttttttctgcaacttgccct
cattgggtatataatgttgctaagaaatacatgaaatctacatatgaacaggtggacctg
attggtaagaagactcaaaaaacagcaataactgtggagcatctggctatcaagtgccac
tggacccaaagggcagcagttatcggggatgtaatccgagtgtacagtggttatcaaggg
cgcactatcatcttctgtgaaaccaagaaagaagcccaggagttgtcacagaatgcggcc
gtgaggcaggatgcccagtcgttacatggagatattccacagaagcaaagggaaatcacc
ctgaagggttttagaaatggcgattttggagttttggttgcaaccaatgttgctgcacgt
gggttagacatccctgaggttgatctggttgtacagagttgtccaccaaaggatgtggag
tcctacattcatcgctctgggcgtacaggtagagctggaaggactgggatttgcatctgc
ttttatcagcacaaggaagaatatcagttaaccctagtggagcaaaaagcggggattaaa
tttaaacgaataggtgttccttctccaacagagataataaaagcttctagtaaagatgcc
atcaggcttttggattctgtgcctcctactgcgattggtcacttcaagcagtcagctgag
aagctgatagaggagaagggagctgtggaagccctggcagcagccctggcccatatttca
ggtgccacatcagtggaccagcgctctttgatcaactcagatgcgggttttgtgaccatg
atcttgcggtgctcaattgaaatgccaaacattagttatgcttggaaggaacttaaagag
caactgggtgaggatattgattccaaagtgaagggaatggtctttctcaaaggaaagcag
ggtgtttgctttgatatccctactgcagcagtaacagaagtacaggaaaaatggcatgat
tcccgacgctggcagctctctgtggccaccgagcaaccagagctggaaggaccacgggaa
ggttatcgaagcttcaggggacagcgggaaggcggtcgaggtttcaggggacagcagaaa
ggaaacagaagcttcaggggacagcgggaaggaaacagaaacttcaggggacagcgatca
ggaggtggcagcagaagcaacagattccaaaacaaaggccagaagcggagttttagcaaa
gcgtttggacagtaa
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integrated database retrieval system
