Sus scrofa (pig): 100153354
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Entry
100153354 CDS
T01009
Symbol
CNOT2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100153354 (CNOT2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssc03019
]
100153354 (CNOT2)
Messenger RNA biogenesis [BR:
ssc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100153354 (CNOT2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
100153354 (CNOT2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
100153354
NCBI-ProteinID:
NP_001230346
Ensembl:
ENSSSCG00000000502
UniProt:
A0A8D0MV36
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All DBs
Position
5:<34470911..34548968
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AA seq
540 aa
AA seq
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MVRTDGHTLSEKRNYQVTNSMFGASRKKFVEGVDSDYHDENMYYSQSSMFPHRSEKDMLA
SPSTSGQLSQFGASLYGQQSALGLPMRGMSNNTPQLNRSLSQGTQLPSHVTPTTGVPTMS
LHTPPSPSRGILPMNPRNMMNHSQVGQGIGIPSRTNSMSSSGLGSPSRSSPSIICMPKQQ
PSRQPFTVNSMSGFGMNRNQAFGMNNSLSSNIFNGTDGSENVTGLDLSDFPALADRNRRE
GSGNPTPLINPLAGRAPYVGMVTKPANEQSQDFSIHNEDFPALPGSSYKDPTSSNDDSKS
NLNTSGKTSSSTDGPKFPGDKSSTTQNNNQQKKGIQVLPDGRVTNIPQGMVTDQFGMIGL
LTFIRAAETDPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASSPCRPQDIDFHVPSE
YLTNIHIRDKLAAIKLGRYGEDLLFYLYYMNGGDVLQLLAAVELFNRDWRYHKEERVWIT
RAPGMEPTMKTNTYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPHLPSTFNYNPAQQAF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggactgatggacatacattatctgagaaaagaaactaccaggtgacaaacagc
atgtttggtgcttcaagaaagaagtttgtagagggggtcgacagtgactaccatgacgaa
aacatgtactacagccagtcttctatgtttccacatcggtcagaaaaagatatgctggca
tcaccatctacatcaggtcagctgtctcagtttggggcaagtttatacgggcaacaaagt
gcactaggccttccaatgagggggatgagcaacaatacccctcagttaaatcgcagctta
tcacaaggcactcagttaccgagccacgtcacgccaacaacaggggtaccaacaatgtca
cttcacacgcctccatctccaagcaggggtattttgcctatgaatcctaggaatatgatg
aaccactcccaggttggtcagggcattggaattcctagcaggacaaatagcatgagcagt
tcagggttaggtagccccagcagaagctcgccaagcataatatgtatgccaaagcagcag
ccttctcgacagccttttactgtgaacagtatgtctggatttggaatgaacaggaatcag
gcatttggaatgaataactccttatcaagtaacatttttaatggaacagatggaagtgaa
aatgtgacaggattggacctttcagattttccagcattagcagaccgaaacagaagggaa
ggaagtggtaacccaactccattaataaaccccttggctggaagagctccttatgttgga
atggtaacaaaaccagcaaatgagcaatcccaggacttctcaatacataacgaagacttt
ccagcattacctggttccagttataaagatccaacatcaagtaatgatgacagtaaatct
aatttgaatacatctggcaagacaagttcaagtacagatggacccaaattccctggagat
aaaagttcaacaacacaaaataacaaccagcagaaaaaagggatccaggtgttacctgat
ggtcgggttactaacattcctcaaggtatggtgacggaccaatttggaatgattggcctg
ttaacatttatcagagcagcagagacagacccaggaatggtacatcttgcattaggaagt
gacttaacaacattaggcctcaatctgaactctcctgaaaatctctaccccaaatttgca
tcaccctgggcatcttcaccttgtcgacctcaagacatagacttccatgttccatctgaa
tacttaacgaacattcacattagggataagctggcggcaataaaactcggtcgatacgga
gaagatcttctcttctatctctattacatgaatggaggagacgtattacaacttttagct
gcagtagagctttttaaccgtgattggagataccacaaagaagaacgagtatggattacc
agggcaccaggcatggagccaacaatgaaaaccaatacatatgagaggggaacatattac
ttctttgactgtcttaactggaggaaagtagctaaggagttccatctggaatatgacaaa
ttagaagaacggcctcacctgccatccaccttcaactacaaccctgctcagcaagccttc
taa
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