Sus scrofa (pig): 100153369
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Entry
100153369 CDS
T01009
Symbol
NOTCH2
Name
(RefSeq) neurogenic locus notch homolog protein 2 isoform X1
KO
K20994
Notch 2
Organism
ssc
Sus scrofa (pig)
Pathway
ssc01522
Endocrine resistance
ssc04330
Notch signaling pathway
ssc04658
Th1 and Th2 cell differentiation
ssc04919
Thyroid hormone signaling pathway
ssc05165
Human papillomavirus infection
ssc05200
Pathways in cancer
ssc05206
MicroRNAs in cancer
ssc05207
Chemical carcinogenesis - receptor activation
ssc05224
Breast cancer
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
100153369 (NOTCH2)
09150 Organismal Systems
09151 Immune system
04658 Th1 and Th2 cell differentiation
100153369 (NOTCH2)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
100153369 (NOTCH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100153369 (NOTCH2)
05206 MicroRNAs in cancer
100153369 (NOTCH2)
05207 Chemical carcinogenesis - receptor activation
100153369 (NOTCH2)
09162 Cancer: specific types
05224 Breast cancer
100153369 (NOTCH2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
100153369 (NOTCH2)
09176 Drug resistance: antineoplastic
01522 Endocrine resistance
100153369 (NOTCH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
NOD
Notch
NODP
Ank_5
Ank_3
Ank_4
EGF_3
EGF_Teneurin
JAG1-like_EGF2
Elf-1_N
Motif
Other DBs
NCBI-GeneID:
100153369
NCBI-ProteinID:
XP_020946348
Ensembl:
ENSSSCG00000006709
UniProt:
A0A4X1SR23
F1SB08
LinkDB
All DBs
Position
4:100951522..101152348
Genome browser
AA seq
2471 aa
AA seq
DB search
MPALRPAPLWALLALLLCRAAPARALQCRDNYEPCVNEGICIAYHNGTGYCKCPEGFLGE
YCQHRDPCEKNRCQHGGTCVAQAMLGKATCRCAMGFTGENCQYSTTHPCFMSHPCQNGGT
CHVLSRDAYKCTCQVGFTGKLCQWTDACLSHPCANGSTCTTVANQFSCTCLAGFTGQKCE
TDVNECDVPGQCQNGGTCLNLPGSYQCQCPQGFTGQHCDSPYVPCAPSPCVNGGTCRQTG
DFTFECNCLPGFEGITCERNIDDCPNHKCQNGGVCVDGVNTYNCRCPPQWTGQFCTEDVD
ECLLQPNACQNGGTCTNRNGGYGCVCVNGWSGDDCSENIDDCAFASCTPGSTCIDRVASF
SCMCPEGKAGLLCHLDDACISNPCHKGALCDTNPLNGQYICTCPQGYKGADCTEDVDECA
MANSNPCEHAGKCVNTDGAFHCECLKGYAGPRCEMDINECHSDPCQNDATCLDKIGGFTC
LCMPGFKGVHCELEINECQSNPCVNSGQCVDKVNRFQCLCPPGFTGPVCQIDIDDCSSTP
CLNGAKCIDHPNGYECQCATGFTGVLCEENIDNCDPDPCHHGQCQDGIDSYTCICNPGYM
GAICSDQIDECYSSPCLNEGRCIDLVNGYQCNCQPGTSGVNCEINFDDCASNPCVHGVCV
DGVNRYSCVCSPGFTGQRCNIDIDECASNPCRKGATCINDVNGFRCMCPEGPHHPSCYSQ
VNECLSNPCIHGNCTGGLSGYKCLCDAGWVGINCEVDKNECLSDPCQNGGTCDNLVNGYR
CTCKKGFKGHNCQVNIDECASNPCLNQGTCFDDISGYTCHCVLPYTGKNCQTVLAPCSPN
PCENAAVCKEAPNFESYTCLCAPGWQGQRCSVDIDECISKPCMNHGLCHNTQGSYMCECP
PGFSGMDCEEDIDDCLANPCQNGGSCIDGVNTFSCLCLPGFIGDKCQTDMNECLSEPCKN
GGTCSDYVNSYTCKCQAGFDGVHCENNIDECTESSCFNGGTCVDGLNSFSCLCPVGFTGP
FCLHEINECNSHPCLNEGICVDGLGTYRCICPLGYTGKNCQTLVNLCSRSPCKNKGTCVQ
EKAESRCLCPSGWAGAYCDVPSVSCEVAASHRGVPVDRLCQHSGVCINAGNSHHCQCPLG
YTGSYCEEQLDECSSNPCQHGATCRDFIGGYRCECVPGYQGVNCEYEVDECQNQPCQNGG
TCIDLVNHFKCSCPPGTRGLLCEENIDDCARGPHCLNGGQCVDRIGGYSCRCLPGFAGER
CEGDINECLSNPCSSEGSLDCIQLTNDYLCVCRSAFTGRHCETFVDVCPQMPCLNGGTCA
VASNMPDGFICRCPPGFSGARCQSSCGQVKCKKGEQCVHTASGPRCFCPNPQDCESGCAS
SPCQHGGSCYPQRQPPYYSCQCSPPFWGSHCELYTAPPSAPPATCLSQYCADKARDGVCD
EACNSHACQWDGGDCSLTMENPWANCTSPLPCWDYINNQCDELCNTAECLFDNFECQGNS
KTCKYDKYCADHFRDNHCDQGCNSEECGWDGLDCAGDRPENLAEGTLVIVVLMPPEQLLQ
DARSFLRALGTLLHTNLRIKRDSQGDLMVYPYYGEKSAAMKKQKMTRRSLPGDQEQEVAG
SQVFLEIDNRQCVQDSDQCFKNTDAAAALLASHAIQGTLSYPLVSVVSESLTPKRTQLLY
LLAVAVVIILFIILLGVIMAKRKRKHGSLWLPEGFTLRRDSSNHKRREPVGQDAVGLKNL
SVQVSEANLIGSGTSEHWVDDEGPQPKKAKAEDEALLSEEDDPIDRRPWTQQHLEAADIR
RTPSLALTPPQAEQEVDVLDVNVRGPDGCTPLMLASLRGGSSDMSDEDEDAEDSSANIIT
DLVYQGASLQAQTDRTGEMALHLAARYSRADAAKRLLDAGADANAQDNMGRCPLHAAVAA
DAQGVFQILIRNRVTDLDARMNDGTTPLILAARLAVEGMVAELINCQADVNAVDDHGKSA
LHWAAAVNNVEATLLLLKNGANRDMQDNKEETPLFLAAREGSYEAAKILLDHFANRDITD
HMDRLPRDVARDRMHHDIVRLLDEYNVTPSPPGTVLTSALSPVICGPNRSFLSLKHTPMG
KKSRRPNAKNAVPTSLPNLAKEGKDAKGNRRKKSLSDKGQLSESSVTLSPVDSLESPHTY
VSDTTSSPMITSPGILQASPNPMLAPAAPPAPVHAQHALSFSNLHEMQPLAHGTSTVLPS
VSQLLSHHHIVPPGSSSAGSLGRLHPVTVPADWMNRVEVNETQYNEMFSMVLAPAEGTHP
GITPQSRPPEGKHLTTSREPLPPIVTFQLIPKGSIAQPAGAAQPPSNCPPAVAGNLPTMY
QIPEMARLPSMAFPTGMMPQQDGQVAQTILPAYHPFPASVGKYPTPPSQHSYASSNAAER
TPSHSGHLQGEHPYLTPSPESPDQWSSSSPHSASDWSDVTTSPTPGGAGGGQRGPGTHMS
EPPRGNMQVYA
NT seq
7416 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccctgcgccccgctccgctgtgggcgctgctggcgctcttgctgtgccgtgcg
gcccccgcgcgtgcactgcaatgtcgggacaactatgagccctgtgtaaatgaaggaata
tgtattgcctaccacaatggcacaggatactgcaaatgtccagagggcttcttgggagaa
tattgtcaacatcgagacccttgcgagaagaaccgctgccagcatggtgggacatgtgtg
gcccaggctatgttggggaaagccacatgccgatgtgccatgggcttcacaggcgagaac
tgccagtactcaaccactcacccctgctttatgtctcacccctgccagaatggaggcacc
tgccatgtgcttagccgggatgcctacaagtgcacctgccaagttggttttacaggtaaa
ctgtgtcaatggactgatgcctgcctgtctcatccctgtgcaaatggaagtacctgtacc
acagtggccaaccagttctcctgcacttgcctcgcaggcttcacagggcagaagtgtgag
actgacgtcaatgaatgtgacgttccaggacagtgccagaatgggggcacctgcctcaac
cttccaggttcctatcagtgccaatgtccccagggctttacaggccagcactgtgacagc
ccctatgtgccctgtgcaccctccccctgtgtcaatggaggcacctgccggcagactgga
gacttcacctttgagtgcaactgccttccaggtttcgaaggcatcacctgtgagaggaat
attgatgactgccctaaccacaagtgtcagaatggaggggtttgtgtggatggggtcaac
acttacaactgccgctgcccccctcagtggacaggacagttctgcacagaggatgtagat
gagtgcctgctacaacccaatgcatgtcagaatggaggcacctgtaccaaccgcaacggg
ggctacggctgcgtatgtgttaatggctggagtggagatgactgcagtgagaacattgac
gactgtgcctttgcctcctgcactccaggctccacctgcattgaccgtgtagcctccttc
tcttgcatgtgcccagaaggaaaggcaggtctcttatgtcatctggatgatgcatgcatc
agcaatccctgccacaagggggcactgtgtgataccaaccctttgaatggacagtatatt
tgcacctgcccacaaggctacaaaggggctgattgtacagaagatgtggatgagtgtgcc
atggccaatagcaatccttgtgagcatgcaggaaaatgtgtgaacacagatggtgccttc
cactgtgagtgtctgaagggctatgcagggcctcgttgtgagatggacatcaatgagtgc
cattcagacccctgccagaatgatgccacctgtctggataagattggaggcttcacgtgt
ctgtgcatgccaggtttcaaaggtgtgcattgtgaattggagataaatgaatgtcagagc
aacccttgtgtgaacagtggacagtgtgtggataaagtcaatcgcttccagtgtctgtgt
ccgcctgggttcactgggccagtctgccagatcgatattgacgactgttccagtactcca
tgtctgaatggggcaaagtgtatcgatcacccaaatggctatgaatgccagtgtgccaca
ggattcactggtgtgttatgtgaggagaacattgacaattgtgaccccgacccttgccac
cacggccagtgtcaagatgggattgattcctacacctgcatctgcaatccggggtacatg
ggcgccatctgcagtgaccagatagatgaatgttacagcagcccttgcttgaatgagggc
cgctgcatcgacctggtaaatggctaccagtgtaactgccagccaggcacatcaggtgtt
aattgtgaaatcaattttgatgactgtgcaagtaacccttgtgtccatggagtctgtgtg
gatggcgttaatcgttacagctgtgtctgctcaccaggattcacagggcagagatgtaac
attgacattgatgagtgtgcctccaatccctgtcgcaagggtgcaacgtgcatcaatgat
gtgaacggtttccgttgtatgtgccccgaggggccccatcaccccagctgttactcgcag
gtgaatgagtgcttgagcaatccctgcatccatggaaactgtactgggggcctcagtgga
tacaagtgcctctgcgatgcaggctgggttggaatcaactgtgaagtggacaaaaatgaa
tgtctttctgatccatgccagaatggaggaacttgtgacaatctggtgaatggataccgg
tgcacttgcaagaagggctttaaaggccataactgccaggtgaatattgatgaatgtgct
tcaaatccatgtctaaaccaaggaacctgctttgatgacataagcggttatacttgccac
tgtgtgctgccatacacaggcaagaactgtcagactgtgttggctccttgttccccaaac
ccttgtgagaatgctgctgtttgcaaagaagcaccaaattttgagagttacacctgcttg
tgtgctcctggctggcaaggtcagcgatgttcagttgacattgatgagtgtatctccaag
ccctgcatgaaccacggtctctgccataacacccagggcagctacatgtgtgagtgtcct
ccaggcttcagtggtatggactgtgaggaggacattgatgactgccttgccaatccttgc
cagaatggaggttcctgtatcgatggagtgaatactttctcctgcctttgccttccgggc
ttcattggggacaagtgtcagacagacatgaatgagtgtctgagtgaaccctgtaagaat
ggtgggacctgctccgactatgtcaacagctacacctgcaagtgccaggcaggatttgat
ggagtccactgtgagaacaatattgacgagtgcactgagagctcctgtttcaatggtggc
acgtgtgtcgatgggcttaactccttctcttgtttgtgccctgtgggcttcactggcccc
ttttgcctccatgagatcaatgaatgcaactctcatccatgcctgaatgaaggaatatgt
gttgatggccttggtacctaccgctgcatctgcccattgggctacacagggaaaaactgt
cagaccctggtgaacctctgcagtaggtctccatgcaagaacaaaggtacctgtgttcag
gagaaagcagagtcccgatgcctgtgtccatccggatgggccggtgcttactgtgatgtg
cccagtgtctcctgtgaggtggcggcctcccacagaggggtgcccgtggaccgcttgtgc
cagcactcaggcgtctgtatcaacgccggcaactcgcatcactgccagtgccccctgggc
tacaccgggagctactgtgaggaacagcttgatgagtgctcatcgaatccctgccagcac
ggagccacctgcagggacttcattggtggctacaggtgtgagtgtgtcccagggtatcag
ggtgtcaattgcgagtatgaagtggatgagtgccagaaccagccctgccagaatggaggc
acctgcatcgacctcgtgaaccatttcaagtgctcctgcccaccaggcactcggggtctg
ctttgtgaagagaacattgatgactgtgccaggggtccccactgccttaatggtggccag
tgtgtggataggattgggggctacagttgtcgctgcttgccaggctttgctggagagcgg
tgtgagggggacatcaacgagtgcctctccaacccctgcagctctgaaggcagcctggac
tgcatccagctgaccaatgactacctgtgcgtctgccgcagtgcctttaccggtcgtcac
tgtgaaactttcgtcgatgtgtgtccccagatgccctgcctgaatggagggacttgtgct
gtggccagcaacatgcctgatggtttcatttgtcgttgtcccccgggattctccggggca
agatgccagagcagctgtggacaagtgaagtgcaagaaaggggaacagtgtgtgcacaca
gcctcgggaccccgctgcttctgccccaacccccaggactgtgagtcaggctgtgccagt
agcccctgccagcatgggggtagctgctaccctcagcgccagcctccgtattactcttgc
cagtgttctccaccgttctggggcagccactgtgaactctacacagcaccccccagcgcc
cctcctgccacctgtctgagccagtattgtgccgacaaagctcgggatggcgtctgcgat
gaggcctgcaacagccatgcctgccagtgggatgggggagactgttccctcaccatggag
aacccctgggccaactgcacctccccacttccctgctgggactatatcaacaaccagtgt
gatgagctgtgcaacacagccgagtgcctgtttgacaactttgaatgccagggaaatagc
aagacatgcaaatacgacaaatactgtgcagaccacttccgagacaaccattgcgaccag
ggatgcaacagtgaggagtgtggctgggatgggttggactgtgctggtgaccggccagaa
aacctggcagagggtaccctggttatcgtggtactgatgccacctgaacagctgctccag
gatgctcgcagcttcttgcgggcactgggcactctgctccacaccaacttgcgtatcaaa
cgggactcccagggggacctcatggtctacccctactacggggagaagtcagctgccatg
aagaagcagaaaatgacacgcaggtcccttcctggtgatcaagaacaggaagtggccggc
tctcaggtatttctggaaattgacaaccgccagtgtgttcaagattcagaccagtgcttt
aagaacacagatgcagcagcagctcttctggcttctcacgccatccaggggaccctgtcg
taccctcttgtgtctgttgtcagtgaatccctcacccccaaacgcactcagcttctctat
ctacttgctgttgctgttgtcattatcctgtttattatcctgctgggggttattatggcc
aaaagaaagcgtaagcatggctccctctggttgcctgaaggtttcacccttcgccgtgac
tccagcaatcacaaacgtcgtgagccagtgggacaggatgctgtaggactgaaaaatctc
tcagtgcaagtctctgaggcgaacctaattggttctggaacaagtgaacactgggtcgat
gatgaggggccccagccaaagaaagccaaggctgaagatgaggctttactctcagaagaa
gatgatcccattgatcggcgaccatggacgcagcagcaccttgaagctgcagatatccgc
aggacaccgtcgttggctctcactcctccgcaggcagagcaggaggtggatgtgctggat
gtgaatgtccgcggcccagatgggtgcaccccactgatgctggcttctctccgaggaggc
agctcagatatgagtgatgaagatgaagatgcagaggactcttctgccaacatcatcaca
gacttggtctaccagggtgctagcctccaggctcagacagaccggactggtgagatggcc
ctgcaccttgcagcccgctactcgagggctgatgctgccaaacgtctcctggatgcaggt
gcagatgccaatgcccaggacaacatgggccgctgccctctccatgccgcagtggccgct
gatgcccagggtgtcttccagatattgatccgcaaccgagtaactgatctagatgccagg
atgaatgatggtactacacccctgattctggctgcccgcctagctgtggaaggaatggtg
gcggaattgatcaattgccaagcagatgtgaatgcagtggatgatcatggaaaatctgct
cttcactgggcagctgctgtgaataatgtggaggcaacccttttgctgttaaaaaacggg
gccaaccgagatatgcaggacaacaaggaagagacacctctgtttcttgctgcccgggag
gggagctatgaagctgccaagatcctgttggaccattttgccaatcgggacatcacagac
cacatggatcgtcttccccgggatgtggctcgggaccgcatgcaccatgacatcgtgcgc
ctcttggacgagtacaatgtgacaccgagccctccaggcactgtgctgacttctgctctc
tcacctgtcatctgtgggcccaacagatcttttctcagtctgaagcacaccccgatgggc
aagaagtctagacggcccaatgccaagaatgctgtgcccactagtctccctaacctggcc
aaggagggcaaggatgccaaggggaataggaggaagaagtctctgagtgacaagggccag
ctgtctgagagctcagtgactctctcccctgtcgattccctagaatctcctcacacttat
gtttctgataccacatcctctccaatgatcacatctcctggaatcttacaggcctcaccc
aaccctatgttggcccctgctgcgccccctgccccagtccatgcacagcatgcactgtcc
ttctctaaccttcatgagatgcagcccttggcccatgggaccagcactgtgcttccctca
gtgagccagctgctgtcccaccaccacattgttcccccaggcagcagcagtgccgggagc
ttgggtaggctacatccagtcactgtcccagcagactggatgaaccgcgtggaggtgaat
gagacccagtacaatgagatgtttagtatggtcctggctccagctgagggcacccaccct
ggcataactcctcagagcaggccgcctgaagggaagcatttaaccacctctcgagagccc
ttgccccccattgtgactttccagctaatccccaaaggcagcattgcccaaccggctggg
gctgcccagcctccatccaactgccctccagctgttgcaggcaatctgcccactatgtat
cagattccagaaatggctcgtttgcccagtatggcttttcccactggcatgatgccccag
caggatgggcaggttgctcagaccattctcccagcctatcatccctttccagcctctgtg
ggcaagtaccccacaccaccttcacagcatagttatgcttcctccaatgctgctgagaga
acgcccagtcacagtggccacctccagggcgagcatccctatctgacaccatccccagaa
tctcctgaccagtggtcaagttcatcaccccactctgcttctgactggtcagatgtgacc
accagccctactcccgggggtgctggaggaggtcagcggggacctgggacacacatgtct
gagccaccacgcggcaacatgcaggtttatgcatga
DBGET
integrated database retrieval system
